Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1494 ATGAAATCTTGTTTTTCAAAGAACAAGAAAAAACCGTTCTCAATGCTTCCTTTACGTTTAACCGTTGTTGTTTCATCTCTCATTCTTCTTTGTTCAATCTTCCAACCATTCTGCCTTGGAATCCGTTCTTTCCCAACAACCAACACCGCAGAGCACTCACCTACTCCGTTTCGTTTCTCGGGTGCTTTCTCTGAGGCACCCGAGTATCGAAACGGAGCAGGTTGTCCGAAACAAAAATCCAAAACCTTATTCCCTTCATCATGTGACCCTTCTTTAGTCCACATAGCAATGACCCTCGACTCCGGTTATCTCCGTGGCTCCATCGCCGCTGTCCACTCCGTACTCCGCCACTCTTCCTGCCCGGAAAATATCTTTTTCCATTTCATCTCCGCTGAATTCGACCCAACTACACCACGGACGCTAACTCGTTTAGTAGCGTCTGTTTTTCCGTCGCTAAACTTTAAAGTTTACATTTTTCGTGAAGACACTGTTATCAACCTTATCTCATCTTCCATTCGTTTAGCCCTTGAAAACCCATTAAACTATGCAAGAAACTATCTTGGTGACATGCTTGATACATGTGTTGAACGTGTAATCTATCTTGATTCAGATATAGTAGTTGTTGATGATATTTCAAAGCTTTGGAGTGTAAAAATGGACGCAAAAAAAGTCATTGGTGCACCAGAATATTGTCATGCAAATTTCACCAAATACTTCACAGATGAGTTTTGGAATGACCCTTTACTCTCAAGAGTCTTTAAAGCAAGAAAAGCTTGTTATTTCAACACTGGTGTAATGGTAATGGATTTGATGAAATGGAGAGAAGGTAACTATAGAAGAAAGATTGAAAACTGGATGGAGTTACAAAAGAAGAGAAGAATCTATGAGCTAGGTTCATTGCCACCTTTTTTACTTGTTTTTGCAGGAAATGTTGAAGCTATTGATCATAGATGGAATCAACATGGACTTGGTGGTGATAATTTGAATGGTGTTTGTAGATCTTTGCATCCTGGTCCTGTTAGTTTATTGCATTGGAGTGGAAAAGGAAAACCTTGGGTTAGGCTTGATGAGAAAAAAGCTTGTCCTTTAGATTCACTTTGGGAGCCTTATGATCTATACAAGCCAAGAAATCATTTGATGGTTCATGGTGGTGGAGATAAAGATCAAGAGATTCAAAATTGGAGTTTTTCTTCTTCAATTTTGGTTGGTTATGCTCATGATTTCTTGTGA 1230 0.3943 MKSCFSKNKKKPFSMLPLRLTVVVSSLILLCSIFQPFCLGIRSFPTTNTAEHSPTPFRFSGAFSEAPEYRNGAGCPKQKSKTLFPSSCDPSLVHIAMTLDSGYLRGSIAAVHSVLRHSSCPENIFFHFISAEFDPTTPRTLTRLVASVFPSLNFKVYIFREDTVINLISSSIRLALENPLNYARNYLGDMLDTCVERVIYLDSDIVVVDDISKLWSVKMDAKKVIGAPEYCHANFTKYFTDEFWNDPLLSRVFKARKACYFNTGVMVMDLMKWREGNYRRKIENWMELQKKRRIYELGSLPPFLLVFAGNVEAIDHRWNQHGLGGDNLNGVCRSLHPGPVSLLHWSGKGKPWVRLDEKKACPLDSLWEPYDLYKPRNHLMVHGGGDKDQEIQNWSFSSSILVGYAHDFL* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1494 409 Pfam Glycosyl transferase family 8 94 354 IPR002495 GO:0016757
Mtr5g1494 409 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 94 368 IPR029044 -
Mtr5g1494 409 PANTHER GALACTURONOSYLTRANSFERASE-LIKE 9-RELATED 21 378 - -
Mtr5g1494 409 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 21 378 - -
Mtr5g1494 409 SUPERFAMILY Nucleotide-diphospho-sugar transferases 93 375 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1494 Mtr-Chr5 15875338 15877070 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1494 16 374 Glycosyltransferase AT1G70090 71.271 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1494 - - vra:106762685 621.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1494 5 15875338 15877070 Mtr5g1494 5 15875338 15877070 ECH