Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1488 ATGGAGTGCGCGGCGAAGGGAAGCGGAACACGGTGCAGCGCCGTCGCAACGACACTGTGTGCACGATGCGAAGCCGTTGCTTATTGCTCACTCTCTCACCGAATTGCGCATTGGAATCATCACAAACACGAGTGTGATAGATTACAGCAACAAATGGAGAGTGTAGAAGAACTCAATGATTTTCCTTTCACTTCCTCTCATGAAGCCACATTTCAGATTTGTGCAAAACAAGAAACTAGGTGTTCATTTTTGACGAAGAGAGGCCTTCATCGAGTGGGAATATGGATGCTTGAATGCCATTGTGAAACATCATCTGCTTCATTTGATCTTTTAAGGTCAAACAATTGCTGGAACCTTCCAAGTGTTTTGTGCCCATGTCGCGGTCCCGACTCTCTGGTATCAGAGCAGTTGTGTAGTTGGAGAGACTACTATAACTGGAGGGGCATCCCACTAGACTCACCTATTGCTTTGCTTCTTCACTGGCCACTTACAATATATCATGCTGCTCAACTTGTTGGAATTACAACCTTGAATCTCGACGTCAGTGATAAGTTGTACATACATTACCTTGGACCTGAGAAGGAGCTGCTACAACTTGCTGTGTTTGGAGAATTACTTGCCCTCTTCCCTGGTGTACATATTCATATAGATCTTGTTGGACCTGCAATTCATTCTCAAAGGGATGGTGAAAAGATCGGCATTTCCAAGTATCCTTGTTGCAATGAAGCCAACTGTGTGTGCAAACTAGTGACTGAAAATGTCAGTATAACCTCTGCATTGACATTGCAGCTTTGGCGAGGATTTTATCATGACAGATACAAAGATATTGTTAAGGATTCCTTTCCTCACCTAATTATTGCTCCAAATGGCGGCATTGCTGCCTATTCCAGTTGGTTACCAAGTATTGAGTTAATTGGAAAGATTGATGTCCCTGCAGTTTTTACTGATTATTGTGAAGAAGCTTGTCATCTTGCAGCAAGTTGCATAAAGACTGTAACTGGACGCCCTCTTAGATTACCTGGTTCTTGA 1029 0.4334 MECAAKGSGTRCSAVATTLCARCEAVAYCSLSHRIAHWNHHKHECDRLQQQMESVEELNDFPFTSSHEATFQICAKQETRCSFLTKRGLHRVGIWMLECHCETSSASFDLLRSNNCWNLPSVLCPCRGPDSLVSEQLCSWRDYYNWRGIPLDSPIALLLHWPLTIYHAAQLVGITTLNLDVSDKLYIHYLGPEKELLQLAVFGELLALFPGVHIHIDLVGPAIHSQRDGEKIGISKYPCCNEANCVCKLVTENVSITSALTLQLWRGFYHDRYKDIVKDSFPHLIIAPNGGIAAYSSWLPSIELIGKIDVPAVFTDYCEEACHLAASCIKTVTGRPLRLPGS* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1488 342 SUPERFAMILY HIT/MYND zinc finger-like 11 51 - -
Mtr5g1488 342 PANTHER ZINC ION BINDING PROTEIN 1 340 - -
Mtr5g1488 342 ProSiteProfiles Zinc finger MYND-type profile. 1 45 IPR002893 -
Mtr5g1488 342 Pfam MYND finger 12 45 IPR002893 -
Mtr5g1488 342 PANTHER ZINC ION BINDING PROTEIN 1 340 - -
Mtr5g1488 342 Gene3D - 2 52 - -
Mtr5g1488 342 Pfam MSS51 C-terminal domain 162 332 IPR046824 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1488 K24081 - gmx:100808017 565.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1488 5 15811518 15817870 Mtr5g1488 5 15811518 15817870 ECH