Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1471 ATGTCTAATTCTTCGAGGGGTCGAATTACCATTACTCTTGGACGCAGTGGTCAGGTTGTGAAGAGGGATGTTACTGCGGTGGATGTTCCTTACTCTTCTTCTATGTCTTCGGCTGGGACTAAGCGGTCTGTACGAGACAGAATTGGATATAGTGGAGATAGTTCCATGAGGCATGGAAATGGAGTCAGCGGCAATAAACGACAGCGAGGAGATGCAAGCATGCGAAATGGACCTGACGATGGGCGTATTGGCAAAGATGATCTCCGATTGAAACTCATGCGAAAAAGTGCGTCGAGGAGAGATGAAAGTAATGACAATAACAGGAATGTCGATCTCCGTGAAAAATTGAAAAAGACAGCTCACCCTCCGACAAACAGTTTTAATTCAAAGCAACACATGCCGGAACCAAGGGAACCAAGCTTGTTCAGGCCAGTTCCTTCAGCTAGAAGTTCTGATGATATAATGCGTATGGAATCCATGAGAAACTCATACTCTCCTTGGACACTGGATCAAATTCGGCAAAGATCACCTGAAGAGTATCCAAGTACTTCCAGGGGGATTTCCCCCCAAAGAAATGCTGGAGACCCGCAGAGAAGGCCATTAAACAGGACATACGATGGTGTCAGACCAGTTCAATATGCAGGTAGGGATGTTCTTGAAACTTCAAGGCCTCCAAGTGCTGCACCTTCATCTTTCATGCCAAGATCCACAATGTCTACCTTGCCTCCAGTAACTGCCAAGCCTGTACCATCCCATCCTGGTCGACTTCCTCCATCAGGCAGTGTTCCACAAAGGCCTCCATTTGTGCAACCACAAACTGTTGATGGCTTGTTACAAGCACTGGGATTACAAAAATATCAAATTCTTTTCAAGGCTGAGGAAGTGGATATGACTGCATTGAGGCAGATGGGTGAAAACGACCTCAAAGAGCTTGGAATTCCTATGGGTCCAAGGAAAAAACTTCTTCTTGCACTCTTGCCTCGTAAACGTCCACAGTGA 999 0.4615 MSNSSRGRITITLGRSGQVVKRDVTAVDVPYSSSMSSAGTKRSVRDRIGYSGDSSMRHGNGVSGNKRQRGDASMRNGPDDGRIGKDDLRLKLMRKSASRRDESNDNNRNVDLREKLKKTAHPPTNSFNSKQHMPEPREPSLFRPVPSARSSDDIMRMESMRNSYSPWTLDQIRQRSPEEYPSTSRGISPQRNAGDPQRRPLNRTYDGVRPVQYAGRDVLETSRPPSAAPSSFMPRSTMSTLPPVTAKPVPSHPGRLPPSGSVPQRPPFVQPQTVDGLLQALGLQKYQILFKAEEVDMTALRQMGENDLKELGIPMGPRKKLLLALLPRKRPQ* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1471 332 MobiDBLite consensus disorder prediction 72 120 - -
Mtr5g1471 332 Gene3D - 272 332 IPR013761 -
Mtr5g1471 332 MobiDBLite consensus disorder prediction 224 244 - -
Mtr5g1471 332 MobiDBLite consensus disorder prediction 246 265 - -
Mtr5g1471 332 MobiDBLite consensus disorder prediction 31 153 - -
Mtr5g1471 332 MobiDBLite consensus disorder prediction 166 270 - -
Mtr5g1471 332 MobiDBLite consensus disorder prediction 56 70 - -
Mtr5g1471 332 PANTHER PA-PL1 PHOSPHOLIPASE FAMILY 1 321 - -
Mtr5g1471 332 SMART SAM_4 266 331 IPR001660 GO:0005515
Mtr5g1471 332 ProSiteProfiles SAM domain profile. 269 332 IPR001660 GO:0005515
Mtr5g1471 332 MobiDBLite consensus disorder prediction 166 197 - -
Mtr5g1471 332 PANTHER OSJNBA0060P14.15 PROTEIN 1 321 - -
Mtr5g1471 332 SUPERFAMILY SAM/Pointed domain 266 326 IPR013761 -
Mtr5g1471 332 Pfam SAM domain (Sterile alpha motif) 271 325 IPR001660 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1471 Mtr-Chr5 15494077 15501025 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1471 273 325 Glycosyltransferase AT3G07170 60.377 1.83e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1471 - - gmx:100797199 439.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1471 5 15494077 15501025 Mtr5g1471 5 15494077 15501025 ECH