Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1415 ATGATCACCGATTCTTCCATGGCGATCCCTGCTTCATTGAACGATTCCGTCTCTCTCGAACGGAAATTCCTCAAGCATATCCGTGATAACGTTCACGGCAACATCTTCCTCGAGCCTATCTTTTTGAAGTTTGTTGACACAGAACAATTTCAAAGACTCCGTGATTTGAAGCAGCTCGGCCTAAGTCACATGGTTTACCCTGGGGCTGTCCATTCTCGTTTTGAGCATTCACTAGGTGTTTATTGCCTGGCTGGGAAAGCTATTGATATCATTAAAAAATACCAGGGCCCTGAGCTTGGTATTGATCGATTTGACGTATTGGCAGTTAAACTTGCTGGATTACTGCATGATGTTGGTCATGGGCCCTTCAGCCACACTTTTGAGCGCGGGTTCCTTCCCCTGGTTCTTAATGGCCCCACTTGGTCTCATGAGGAAATGTCTGAGAAAATGATAGATTACATTGTTGATGAACACAATATTGATTTGGATTCTCAACTCCTCAAAAAAGTGAAGGAAATGATCACTTCTAGCTCTGTCCATCCTCCCCAAAGAGAGAAGAAGTTCTTATATGATATTGTTGCAAACGGTCGCAATGGAATTGACGTTGACAAATTTGACTACATTGTTCGTGATTCACGTGCTTGTGGCCTAGGGTGCAACTTTCAGCCAGAGAGATTGATGGAGACCATGCAAGTTATGGATGACGAAATTTGTTATCGCTCTACAGATTATCTGACAACTCACAAGTTATTTGCAACCCGTGCTGATTTGCATAGAACAGTCTACACACATGCAAAAGTAAAGGCAATTGAGTTGATGGTTCTGGATGCACTGGTGAAAGCAGATCCATATCTTCATATTGCATCCTCAATTCATCAACCATCTGAATTTTGGAAGTTAGACGACTCAGTTCTCAAAACAATTGAATGTTCTTCCAATCATGAACTGGAGGAATCCAGAAAGTTGGTTCTACGCATTCGCAGAAGGGATCTATACCAGTTATGCAATGAATTTTCTGTTCCAAAGGAAAAACTAGACAACTTCAAAAGCATCACACCCCAAGACATTGTCTGTTCCCAGATCAATGGGACCAATTTGAAAGAAGATGATGTCGCTGTGAGCAACGTTAAAATTGATTTAACACGTGGAATGGAAAACCCTCTTGAAAGAATTAAATTTTTCAAGGACTACGGGAGTAAAGAAAAATTTCCAATCGAAAATGAGCGAATCAGTCATTTGTTGCCAGCATTCTACGAAGACATCATAGTGAGAGTGTACAGCAAGAAGCCTGAACTGGTGGAAGCTGTTTCTGCTGCCTTTGCAAATTATCAGCTCAAGACATTTGGAAGGGAAGCACAAGTGCACGAAACTCCTAAGAAGAAGCAGCGTCTTACGCATGAGACCCACCCTACTGACTTTAACATGTAG 1428 0.4195 MITDSSMAIPASLNDSVSLERKFLKHIRDNVHGNIFLEPIFLKFVDTEQFQRLRDLKQLGLSHMVYPGAVHSRFEHSLGVYCLAGKAIDIIKKYQGPELGIDRFDVLAVKLAGLLHDVGHGPFSHTFERGFLPLVLNGPTWSHEEMSEKMIDYIVDEHNIDLDSQLLKKVKEMITSSSVHPPQREKKFLYDIVANGRNGIDVDKFDYIVRDSRACGLGCNFQPERLMETMQVMDDEICYRSTDYLTTHKLFATRADLHRTVYTHAKVKAIELMVLDALVKADPYLHIASSIHQPSEFWKLDDSVLKTIECSSNHELEESRKLVLRIRRRDLYQLCNEFSVPKEKLDNFKSITPQDIVCSQINGTNLKEDDVAVSNVKIDLTRGMENPLERIKFFKDYGSKEKFPIENERISHLLPAFYEDIIVRVYSKKPELVEAVSAAFANYQLKTFGREAQVHETPKKKQRLTHETHPTDFNM* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1415 475 Pfam HD associated region 224 333 IPR045509 -
Mtr5g1415 475 Gene3D Hypothetical protein af1432 23 330 - -
Mtr5g1415 475 ProSiteProfiles HD domain profile. 73 208 IPR006674 -
Mtr5g1415 475 SUPERFAMILY HD-domain/PDEase-like 21 450 - -
Mtr5g1415 475 PANTHER METAL-DEPENDENT PHOSPHOHYDROLASE 7 463 - -
Mtr5g1415 475 SMART hd_13 69 217 IPR003607 -
Mtr5g1415 475 CDD HDc 71 216 IPR003607 -
Mtr5g1415 475 Pfam HD domain 73 209 IPR006674 -
Mtr5g1415 475 Gene3D - 331 449 - -
Mtr5g1415 475 PANTHER DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE 7 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1415 Mtr-Chr5 14834886 14841078 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1415 K22544 - gmx:100796869 738.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1415 5 14834886 14841078 Mtr5g1415 5 14834886 14841078 ECH