Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mtr5g1408 | ATGCCGGATTCAAAACCAGCATTGAGGAAGCCGGTGTTTTGTAAGGTTGATCAGCTTCTTCCAGGGACTAGAGGACACACCATAATTGTGAAGGTTGTTAGTGTTAAATTGGTAGATCAGAACGATCGTCCTGATGGACTTAAACTCCGCCATATGCGAATGGCTGAATGTTTGGTCGGTGATGAGACTGGGACGATCATATTCACTGCAAGACATGAACAGGTGGATTTGATGACAGAAGGCTCCACTATCATTGTGCGTAATGCCAAAATTGACATGTTCAAAGGAACGATGAGACTTGGTGTGGACGTTTGGGGCCGTATTGAACTCACAGAACCAGCTGCCTTCACAGTCAAGGAAGATAATAACTTGTCCCTAATTGAGTATGAACTGGTGAATGCCGTTTAA | 408 | 0.4436 | MPDSKPALRKPVFCKVDQLLPGTRGHTIIVKVVSVKLVDQNDRPDGLKLRHMRMAECLVGDETGTIIFTARHEQVDLMTEGSTIIVRNAKIDMFKGTMRLGVDVWGRIELTEPAAFTVKEDNNLSLIEYELVNAV* | 136 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mtr5g1408 | 135 | SUPERFAMILY | Nucleic acid-binding proteins | 7 | 133 | IPR012340 | - | |
| Mtr5g1408 | 135 | PANTHER | OS05G0244600 PROTEIN | 1 | 133 | - | - | |
| Mtr5g1408 | 135 | Gene3D | - | 23 | 126 | IPR012340 | - | |
| Mtr5g1408 | 135 | PANTHER | F5O8.30 PROTEIN | 1 | 133 | - | - | |
| Mtr5g1408 | 135 | CDD | SoSSB_OBF | 27 | 110 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mtr5g1408 | Mtr-Chr5 | 14750836 | 14755115 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mtr5g1408 | - | - | mtr:MTR_5g034290 | 271.166 |
Event-related genes