Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1406 ATGGAATGCTATAAATCCTTTTTAGACCATAAAGTAACCAAGTCCTCGCCTTCCCCTGCACTGTGTTGTGTGGAGCCAGTGACTCAAGATGAACAAAATTCTCATATTACAGCTTTTCATTCAGGAGATCGATCCACAAATTCAGATAATGAATCTTCTTCATCAAAGACCGTGCGTGATGTACATATCGAGAAGGGAACCCTCTATATGACCACACTAATCATACCGAAGCAGGAATCCGCATCTAATTCATGTAATGCCACAAATGAGGAGGAAGTTTTCACAATTCTAAATGAAAGATCCCTTTATCCTGTTGGATGGATCCATACGCACCCTTCTCAAAGTTGTTTCATGTCATCGGTGGATCTGCACACTCAATATTCCTACCAGGCGATGATTCCTGAGGCATTTGCGATTGTGTTGGCACCAACTGATACCTCAAGGAGCTGTGGTCTCTTTCGCCTAACCGAACCAGATGGTATGAATATTCTAAGAAATTGTCCGGAGAGGGGATTTCATCCACACAAAGAACCAGATAATGGCAACCCTGTGTATGAGCACTGCTCCAATGTGTACAGAAACTCCAATTTAAGGTTTGAAATCTTTGATTTACGCTAA 618 0.4191 MECYKSFLDHKVTKSSPSPALCCVEPVTQDEQNSHITAFHSGDRSTNSDNESSSSKTVRDVHIEKGTLYMTTLIIPKQESASNSCNATNEEEVFTILNERSLYPVGWIHTHPSQSCFMSSVDLHTQYSYQAMIPEAFAIVLAPTDTSRSCGLFRLTEPDGMNILRNCPERGFHPHKEPDNGNPVYEHCSNVYRNSNLRFEIFDLR* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1406 205 ProSiteProfiles MPN domain profile. 13 161 IPR037518 -
Mtr5g1406 205 SMART pad1_6 51 158 IPR000555 GO:0005515|GO:0008233|GO:0008237
Mtr5g1406 205 Gene3D Cytidine Deaminase, domain 2 32 205 - -
Mtr5g1406 205 SUPERFAMILY JAB1/MPN domain 67 159 - -
Mtr5g1406 205 PANTHER AMSH-LIKE PROTEASE 63 205 - -
Mtr5g1406 205 MobiDBLite consensus disorder prediction 37 58 - -
Mtr5g1406 205 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 75 135 IPR000555 GO:0005515|GO:0008233|GO:0008237
Mtr5g1406 205 MobiDBLite consensus disorder prediction 37 54 - -
Mtr5g1406 205 PANTHER FI19924P1 63 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1406 Mtr-Chr5 14726034 14730335 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1406 K11866 - gmx:100807282 322.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1406 5 14726034 14730335 Mtr5g1406 5 14726034 14730335 ECH