Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1395 ATGAGATGTAAAAAAACATTAGTTGACGGTGTGCCTTTTCTCTTTTGGTGCGTGTGGATATTTTCTGTCGTGATAGAGTCCTGCCCAAACCCTCAATATATGCACCTAATGGTCGTTGGAGACAAATGGGATACATATCTTGAACTTCTGCAAAGTGGTTACACTGAAGGAGATGCACTGGATTCTTTAGGGCTGGTTCGATATTGCTGCAGGCGCATGCTTATGACCCATGTTGAACTTATTGATAAGCTACTGAATTACAATCCTCTGGAAAAGCACGGTGCCAACTAA 291 0.4227 MRCKKTLVDGVPFLFWCVWIFSVVIESCPNPQYMHLMVVGDKWDTYLELLQSGYTEGDALDSLGLVRYCCRRMLMTHVELIDKLLNYNPLEKHGAN* 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1395 96 PANTHER DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC5 FAMILY MEMBER 38 94 IPR000268 GO:0003677|GO:0003899|GO:0006351
Mtr5g1395 96 Gene3D - 32 92 - -
Mtr5g1395 96 PANTHER - 38 94 - -
Mtr5g1395 96 Pfam RNA polymerases N / 8 kDa subunit 38 84 IPR000268 GO:0003677|GO:0003899|GO:0006351
Mtr5g1395 96 SUPERFAMILY RNA polymerase subunit RPB10 38 88 IPR023580 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1395 Mtr-Chr5 14616729 14621309 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1395 K03007 - han:110909358 106.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1395 5 14616729 14621309 Mtr5g1395 5 14616729 14621309 ECH