Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1390 ATGCAAGAGTTAGAGCAATGGAAGGAACAAGCTTCTCACCTGTTGAATGTGGCTAATGATTATCTTCGCGAGGTTCCCCCCAATCAGCTCTATGCCGCTGCTGCTATTGCTGTTTTCACAACTCTACTTCTTTTATTGCGGTTTTTGAAGCGCACCAAGTCTAACACCATTGTGTTGACGGGACTTAGTGGGAGCGGGAAAACCGTTATCTTCTATCAGCTTAGGGATGGCTCTACTCATCAGGGTACTGTTACATCAATGGAACCTAATGAAGACACTTTTGTTCTTCATGGGGAAACAACGAAGAAGGGAAAGATAAAACCAGTTCATATTGTTGATGTTCCTGGACATTCTCGTCTTCGACCCAAGTTGGATGAATACTTGCCTCAAGCAGCTGGCATAGTCTTTGTTGTTGATGCTTTGGACTTCTTACCAAATTGCCGTGCTGCCTCAGAGTACCTATATGATCTGTTGACCAAGGGAAGTGTTGTGAGGAAGAAGATTCCACTGCTTATTCTCTGCAACAAAACCGACAAAGTCACTGCTCACACCAAAGAATTTATCCGCAAACAAATCGAGAAAGAAATCGAAAAATTACGGGCATCGAGAAGTGCAGTTTCAGATGCTGATGTTACAAATGAGTTTACTTTGGGGGTGCCCGGCGAGCCATTTTCCTTTACACAGTGCTCTAACACAGTTACAACTGCAGATGCTTCTGGTTTAACTGGGGAGATATCTCAGCTAGAAGAGTTTATCAGAGCACACGTGAAGCCATAG 777 0.4389 MQELEQWKEQASHLLNVANDYLREVPPNQLYAAAAIAVFTTLLLLLRFLKRTKSNTIVLTGLSGSGKTVIFYQLRDGSTHQGTVTSMEPNEDTFVLHGETTKKGKIKPVHIVDVPGHSRLRPKLDEYLPQAAGIVFVVDALDFLPNCRAASEYLYDLLTKGSVVRKKIPLLILCNKTDKVTAHTKEFIRKQIEKEIEKLRASRSAVSDADVTNEFTLGVPGEPFSFTQCSNTVTTADASGLTGEISQLEEFIRAHVKP* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1390 258 PANTHER TRANSFERRIN 3 258 - -
Mtr5g1390 258 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 204 IPR027417 -
Mtr5g1390 258 Gene3D - 49 255 IPR027417 -
Mtr5g1390 258 ProSiteProfiles small GTPase Arf family profile. 48 252 - -
Mtr5g1390 258 Pfam Signal recognition particle receptor beta subunit 53 233 IPR019009 -
Mtr5g1390 258 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 3 258 IPR019009 -
Mtr5g1390 258 CDD SR_beta 55 252 IPR019009 -
Mtr5g1390 258 Coils Coil 189 209 - -
Mtr5g1390 258 Coils Coil 4 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1390 Mtr-Chr5 14575750 14580005 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1390 1 258 Miscellaneous Gene Families AT5G05670 71.154 2.91e-136 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1390 K12272 - gmx:100800572 440.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1390 5 14575750 14580005 Mtr5g1390 5 14575750 14580005 ECH