Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1387 ATGGCTGCCATAAAAAGAGAACCCAAACAAGAAGCACCCATCCATGGTGATGTTTTAGAAACAATATTTTCATTCGTGCCACTCATCGACCTTGTTCCATCTTGTCACGTATCTAAATCATGGAACAAAACTGTTTTCTCTTCACTTACCCACGTAAGACAAATCAAACCATGGCTCATTGTTTTACCCCAAACATCACGCGCTTCGCGCGTGACCATCGCTCATGCTTATGATCCTCGCTCTCATGCGTGGCTTCAGATAACTAAACACCAACCGTTGATCAACAAAACTCAGGAAATTCCAGCCATTAGATCATCTCATTCAACTCTGCTTTACACCTTATCCCCATCGGAGTTTACGTTTTCACTCGACGCACTTCAACTCGAGTGGCATAAAGCACCGTCACCGCGCGTGTGGCGCACTGATCCAATAGTAGCGCGCGTTGGAAATTGTGTGGTGGTTGCTGGCGGCGCGTGTGAGTTTGAAGATGATCCACTTGCAGTGGAGATGTACAACATGGAGAGCCGTGATTGGGTCAATTGCCAGTCGATGCCAATGACACTGAAGACATCGTCGGCATCCTCGTGGCTATCGGTTGCGGTTGTCGGAGAAACCATGCTCGTGACGGAGAAGAATTCCGGTGTGACGTACACGTTCAATACAACTACGATGGATTGGGAAGGGCCTTATTATCTACGTCCAGATGATAAAAGTGTACTCTACACCGTCACCGGAACTTTGTCAGAGAAATTGACGGTGGCCGGATTGGTGGGTGAACCGGGGAACGTAAGAGAAGTAAAGCTGTGGGCTGTTAAGGAGGAAATAGATTCGGGAATGGAGGAAATAGGTTCGATGCCGAAGGAGATGGTGGAGAAGTTGAGAGGTGATTCAGAGTTTGGTTCAGTTGAAGCAATTTGGGTTGGGAATTTGGTTTACTTGCGTAACACGTTGGTGTTGGATGAACTTGTTGTATGTGAGGTTGTAAATGGGAACTTGTGTGAGTGGAGAAGTGTGAAGAATGCGGCGGTGGACGGTGGAACGAGGATGGTGTTTTGTGGCGGTGATGTGAAAATGGAGGATTTGCAGAGAGCGGTGTTGTCGGAGAAACAAACATTTAGTATGAAACAAATGTGA 1134 0.47 MAAIKREPKQEAPIHGDVLETIFSFVPLIDLVPSCHVSKSWNKTVFSSLTHVRQIKPWLIVLPQTSRASRVTIAHAYDPRSHAWLQITKHQPLINKTQEIPAIRSSHSTLLYTLSPSEFTFSLDALQLEWHKAPSPRVWRTDPIVARVGNCVVVAGGACEFEDDPLAVEMYNMESRDWVNCQSMPMTLKTSSASSWLSVAVVGETMLVTEKNSGVTYTFNTTTMDWEGPYYLRPDDKSVLYTVTGTLSEKLTVAGLVGEPGNVREVKLWAVKEEIDSGMEEIGSMPKEMVEKLRGDSEFGSVEAIWVGNLVYLRNTLVLDELVVCEVVNGNLCEWRSVKNAAVDGGTRMVFCGGDVKMEDLQRAVLSEKQTFSMKQM* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1387 377 Gene3D - 50 369 IPR015915 GO:0005515
Mtr5g1387 377 SUPERFAMILY F-box domain 17 49 IPR036047 GO:0005515
Mtr5g1387 377 PANTHER KELCH REPEAT-CONTAINING F-BOX-LIKE PROTEIN 5 366 - -
Mtr5g1387 377 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 5 366 - -
Mtr5g1387 377 SUPERFAMILY Kelch motif 58 353 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1387 Mtr-Chr5 14540340 14542076 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1387 - - gmx:100819427 469.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1387 5 14540340 14542076 Mtr5g1387 5 14540340 14542076 ECH