Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1347 ATGAAGTTTATGAAACTTGGATCTCGTCCAGATACTTTCTACACTTCAGAAGCTATAAGGACAATCTCTTCTGAAGTTTCTAGTGATCTCATAATTCAAGTAAGGGGAAGTAGATATCTTCTTCACAAGTTTCCCCTGCTATCCAAATGCCTATGCCTGCAAAGATTATGCTCAGAATCACCTCCTGATTCATCTCATCACCAAATAGTTCAACTTCCTGATTTTCCGGGTGGAGTGGAAGCATTTGAGTTGTGTGCTAAGTTCTGCTATGGAATCCAAATTACTTTAAGTCCTTACAACATTGTAGCTGCAAGATGTGCTGCTGAATATCTCCAAATGACTGAAGAAGTTGAAAAAGGAAACTTGATTCACAAGCTTGAGGTTTTCTTTAATTCTTGCATCCTTCATGGTTGGAAGGATACCATAGTAAGTCTTCAGACCACAAAAGCGTTGCATTTGTGGTCTGAAGACTTGGGAATTACCAGCAGATGCATTGAAACTATTGCCTCAAAAGTCTTGAGCCACCCTACAAAGGTGAGTTTGTCGCATAGTCATTCTAGAAGAGTGAGGGATGACATATCTTGCAATGATACAGAAAGTTTGAGAATCAAATCAGGAAGTAAAGGATGGTGGGCTGAAGATTTAGCAGAGCTTAGCATAGACCTTTATTGGAGAACAATGATAGCAATCAAATCTGGTGGCAAGGTTCCTTCAAATCTCATTGGCGATGCATTGAAAATTTATGCATCTAGATGGTTACCAAATATTTCCAAGAACGGAAATAGAAAGAAGAATGTTTCACTAGCCGAGTCTGAGTCTAACTCAGACTCGGCCAGCGAAATAACTTCAAAGCATAGGCTTCTATTGGAGTCAATAGTAAGCTTGCTTCCAACCGAAAAAGGCGCTGTTTCTTGTAGCTTTCTTTTGAAACTATTGAAAGCATCCAATATTCTCAATGCTTCTTCATCTTCAAAGATGGAATTAGCAAGAAGAGTAGGACTTCAATTGGAGGAAGCCACAGTGAATGATCTATTAATACCTTCACTTTCTTATACAAATGATACACTCTATGATGTTGAGTTGGTGATGACTATATTGGAACAGTTCATGTTACAAGGACAAAGTCCACCAACTAGCCCTCCGAGATCGTTGAAAACTTTTGAAAGAAGGCGATCGCGTTCGGCTGAGAATATTAACTTTGAATTACAAGAGAGTAGGAGGTCCTCTTCAGCATCACATAGTTCAAAATTGAAAGTGGCAAAACTTGTGGATAGGTACCTTCAGGAAGTTGCAAGAGATGTGAATTTTTCATTGTCAAAATTCATTGCTCTTGCTGATATTATACCAGAATTTGCAAGATATGATCATGATGATCTCTATAGAGCCATTGACATATATCTCAAGGCTCATCCAGAACTCAACAAGAGTGAAAGGAAAAGACTATGTAGAATTCTTGACTGCAAAAAGCTCTCAATGGAAGCGTGCATGCATGCAGCACAAAATGAGCTACTCCCATTAAGAGTTGTTGTTCAAGTTCTGTTCTTTGAGCAAGCTAGAGCAGCATCATCTGGTGGCAAAGTAACAGAATTACAAAGCAATATCAAAGCATTGCTTACAACACATGGGATTGATCCATCAAAACATACAACAACACAGTTAAGCTCTACTACAAGTATTCAAGGTGAGGATAATTGGAGTGTTTCTGGTTTCAAGTCACCAAAATCAAAGTCTTCAACTCTAAGAATGAAGCTAGCTGAGGAGCATGATGAATTTGATGAAAATGGTTTGGTAAATGATGATGGAATTGGAAGAAACTCTAAATTTAAGTCCATTTGTGCTCTTCCTACACAACCTAAAAAAATGCTTAGTAAATTGTGGTCTACTAATAGAACTGCTACTGAAAAAAATTGA 1911 0.3815 MKFMKLGSRPDTFYTSEAIRTISSEVSSDLIIQVRGSRYLLHKFPLLSKCLCLQRLCSESPPDSSHHQIVQLPDFPGGVEAFELCAKFCYGIQITLSPYNIVAARCAAEYLQMTEEVEKGNLIHKLEVFFNSCILHGWKDTIVSLQTTKALHLWSEDLGITSRCIETIASKVLSHPTKVSLSHSHSRRVRDDISCNDTESLRIKSGSKGWWAEDLAELSIDLYWRTMIAIKSGGKVPSNLIGDALKIYASRWLPNISKNGNRKKNVSLAESESNSDSASEITSKHRLLLESIVSLLPTEKGAVSCSFLLKLLKASNILNASSSSKMELARRVGLQLEEATVNDLLIPSLSYTNDTLYDVELVMTILEQFMLQGQSPPTSPPRSLKTFERRRSRSAENINFELQESRRSSSASHSSKLKVAKLVDRYLQEVARDVNFSLSKFIALADIIPEFARYDHDDLYRAIDIYLKAHPELNKSERKRLCRILDCKKLSMEACMHAAQNELLPLRVVVQVLFFEQARAASSGGKVTELQSNIKALLTTHGIDPSKHTTTQLSSTTSIQGEDNWSVSGFKSPKSKSSTLRMKLAEEHDEFDENGLVNDDGIGRNSKFKSICALPTQPKKMLSKLWSTNRTATEKN* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1347 636 Pfam NPH3 family 210 495 IPR027356 -
Mtr5g1347 636 PANTHER OS12G0117600 PROTEIN 1 634 IPR043454 -
Mtr5g1347 636 SUPERFAMILY POZ domain 22 117 IPR011333 -
Mtr5g1347 636 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 1 634 - -
Mtr5g1347 636 ProSiteProfiles NPH3 domain profile. 209 519 IPR027356 -
Mtr5g1347 636 Gene3D Potassium Channel Kv1.1; Chain A 14 122 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1347 Mtr-Chr5 14037294 14041283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1347 26 591 EF-hand Containing Proteins AT3G44820 33.956 8.46e-93 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1347 - - gmx:100797361 1036.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1347 5 14037294 14041283 Mtr5g1347 5 14037294 14041283 ECH