Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1259 ATGGATAATTCCAAAAACAGAATTAATGACAGTTTGGGTGTTAATAAAATGGGTAAGAATATAAGGAAAAGTCCTTTACATCAACCGAATTTCGGCAATAATGCGGCTAGACAACAGCCTCAGCCTCAGGTTTACAACATAAGCAAGAACGATTTTCGGGATATTGTTCAGCAGCTTACTGGATCACCTTCTCAGGAACCTCCGCCTCGGCCTCCACATAGGCCTCCGCCAAAACCACAGAGTATGCGCTTGCAGAAAATTAGACCTCCCCCGCTATCGCCAATCAACCGACCTCGTTTGCCACCGCCAATGCCAATGCCTGCAGCCCCTCCTCCACTTCCTTACAATAATGCACCTAGACCTGCTCATTATGGACAACCATCGCCTACTCCTTTGACACCCGGGGATTTGTGGGCCAATACAACTGAGTCGCCAATCTCTGCTTACATGCGGTATCTTCAGAATTCGATGATGGATCCAGGTTCAAGGGGTAATCAATTTCCGCCTCAGCCTCAACCACATCCATACCCTCAACAGCAAGTACAAGGAAATTATCAGCCTCAACCTCCTCCACCGGCTTTGCTTCCTAACCCTAACGTGCCACCGATCCCTTCTCCAAGGTTTAACAATGGTCCTGTACCGCCAATGAATGCCCATAATCATCCAATGCCTAGTATTCCTTCACCACATGGAAATGGCCCTCCCCTTTTACCTTCTCCAACCTCTCAATTTCTCTTGCCTTCTCCAACTGGTTACATGAATTTACTGTCCCCTCGGTCACCTTATCCACTATTGTCACCCGGCTTTCAGTTTCCATCACCACTACCCAATTTTCCGTTCTCACCCATGGGACAGTCAGGAATTTTAGGGCCTGGCCCTCAACCACCACCTTCTCCCGGCCTTATGTTTCCATTATCTCCTTCAAGCTTCTTCACCATGCCAAGTCCTAGGTGGAGAGATCAATAG 966 0.4803 MDNSKNRINDSLGVNKMGKNIRKSPLHQPNFGNNAARQQPQPQVYNISKNDFRDIVQQLTGSPSQEPPPRPPHRPPPKPQSMRLQKIRPPPLSPINRPRLPPPMPMPAAPPPLPYNNAPRPAHYGQPSPTPLTPGDLWANTTESPISAYMRYLQNSMMDPGSRGNQFPPQPQPHPYPQQQVQGNYQPQPPPPALLPNPNVPPIPSPRFNNGPVPPMNAHNHPMPSIPSPHGNGPPLLPSPTSQFLLPSPTGYMNLLSPRSPYPLLSPGFQFPSPLPNFPFSPMGQSGILGPGPQPPPSPGLMFPLSPSSFFTMPSPRWRDQ* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1259 321 MobiDBLite consensus disorder prediction 1 136 - -
Mtr5g1259 321 MobiDBLite consensus disorder prediction 26 63 - -
Mtr5g1259 321 PANTHER PROTEIN HAIKU1 1 321 IPR039612 -
Mtr5g1259 321 MobiDBLite consensus disorder prediction 156 245 - -
Mtr5g1259 321 Pfam VQ motif 40 65 IPR008889 -
Mtr5g1259 321 MobiDBLite consensus disorder prediction 289 303 - -
Mtr5g1259 321 MobiDBLite consensus disorder prediction 184 242 - -
Mtr5g1259 321 PRINTS Proline rich extensin signature 63 79 - -
Mtr5g1259 321 PRINTS Proline rich extensin signature 87 99 - -
Mtr5g1259 321 PRINTS Proline rich extensin signature 101 122 - -
Mtr5g1259 321 PRINTS Proline rich extensin signature 171 196 - -
Mtr5g1259 321 PANTHER PROTEIN HAIKU1 1 321 IPR039825 GO:0009960|GO:0080113
Mtr5g1259 321 MobiDBLite consensus disorder prediction 64 84 - -
Mtr5g1259 321 MobiDBLite consensus disorder prediction 91 128 - -
Mtr5g1259 321 MobiDBLite consensus disorder prediction 281 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1259 Mtr-Chr5 12938157 12941262 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1259 - - aprc:113868951 365.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1259 5 12938157 12941262 Mtr5g1259 5 12938157 12941262 ECH