Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1233 ATGAGAACTTCTCTAATGCGAACCGGTTCCGTCCCGGTTCTTAACCCGGTCCACTCCGGTTCAACTCGAACCTCCCTCTCCCGCCAAGCTTCCTTCGCCGGCGAAAACAACTACCGCGTTCAATCACCAAAAGTCTCACTGCATTTTCACTCCACCGACAAACATTCCGACGGAATCAACAGATCTTTGTCAGAAAGCTTGATGATTAACTCACCAATCAAGAATTTCAGCTTTTCTCAGAATCTAAATCGAATCGGATCTCAATCTTTTCCAATTGAGGATACCGGATTTGGCGGCGGAGGCGGATTCGCTCACGGTGATGTAACAGTCACCACCGGCGGAAACGGCGGAGGAAGGATGGAAATCGGCGCGTATTACGAGGAAATGTTGAAGTCAAATCCTGCCGACGCGCTTTTGCTGAGAAATTACGGCAAATATCTTCACGAGGTAGAGAAGAATATGGTGAGAGCAGAGGAATACTACGGAAGAGCGATTCTAGCGAATCCTGAAGATGCGGAATTGCTTTCGCTTTACGGAAAGTTGATATGGGAAATGAGTAGAGATGAAGAAAGAGCTAAATCTTACTTTGATCAAGCAATTCATGTTGATCCTGATGATAGCACGGTGTTGGGATCCTATGCACACTTCATGTGGGAAGCGGAGGAGGAGGAGGATGATGATGATGATGAGGTGGTGGTTAACGGGGGTGGAATGATGGGGAAAGCAGAAGAATCAGCGGTTGGGCTGATCACTACTTTTTAA 762 0.4724 MRTSLMRTGSVPVLNPVHSGSTRTSLSRQASFAGENNYRVQSPKVSLHFHSTDKHSDGINRSLSESLMINSPIKNFSFSQNLNRIGSQSFPIEDTGFGGGGGFAHGDVTVTTGGNGGGRMEIGAYYEEMLKSNPADALLLRNYGKYLHEVEKNMVRAEEYYGRAILANPEDAELLSLYGKLIWEMSRDEERAKSYFDQAIHVDPDDSTVLGSYAHFMWEAEEEEDDDDDEVVVNGGGMMGKAEESAVGLITTF* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1233 253 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 1 229 - -
Mtr5g1233 253 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 229 - -
Mtr5g1233 253 Gene3D Tetratricopeptide repeat domain 120 225 IPR011990 GO:0005515
Mtr5g1233 253 MobiDBLite consensus disorder prediction 1 25 - -
Mtr5g1233 253 SUPERFAMILY TPR-like 124 223 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1233 - - aprc:113869688 259.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1233 5 12630478 12632466 Mtr5g1233 5 12630478 12632466 ECH