Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1231 ATGGCAAAAAACGGCGACACCATTGAAATCATTAACGTAAACAAACCTATGCCTGTGCAATCCAAATTTCCGTTAAGCTTTTTTGAAACAACGGTGGCTTCAACGGTAGCTTTGGGCTTTATATTGGGTCTTCTTGGTGTTTATCTTACCATGCCAGATTCAGATTATAGCTTCCTTAAACTACCTCGTACCCTTCATGATCTTCAGCTTCTTAGAGATAACCTTGAGAGCTATACAAGTGACTACACTGCACAAGTCTTGGTGGGATACTGCGTGGTTTATATTTTCATGCAGACTTTCATGATTCCAGGGACTGTGTTCATGTCATTGCTTGCCGGAGCACTCTTTGGTGTCTTTAAAGGTGTGGCTCTTGTTGTATTCACTGCCACAGCGGGAGCTTCTTCGTGTTTTTTCCTGTCAAAAATTATCGGACGACCCCTTCTCTTCTCTCTCTGGCCAGACAAGTTGAAGTTCTTCCAAACCCAGGTGGCTAAAAGAAGAAAGAGTTTGCTGAACTACATGCTTTTTCTGAGATTGACTCCGACTCTTCCCAACACGTTTATTAATTTTGCATCACCAATTGTGGATGTTCCCTATCATATTTTCTTCCTTGGAACTGTCATTGGACTCATACCTGCTGCTTATGTCACAGTCAGGGCAGGGTTAGCTCTTGGAGAGCTACAATCTGTGGGAGATCTCTATGATTTCAACTCAATCGCTACATTATTCTTCATAGGCATTATTTCAGTTACACCAACACTAATGGGCAAGAGCGATTCATAA 783 0.4202 MAKNGDTIEIINVNKPMPVQSKFPLSFFETTVASTVALGFILGLLGVYLTMPDSDYSFLKLPRTLHDLQLLRDNLESYTSDYTAQVLVGYCVVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVFTATAGASSCFFLSKIIGRPLLFSLWPDKLKFFQTQVAKRRKSLLNYMLFLRLTPTLPNTFINFASPIVDVPYHIFFLGTVIGLIPAAYVTVRAGLALGELQSVGDLYDFNSIATLFFIGIISVTPTLMGKSDS* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1231 260 Pfam SNARE associated Golgi protein 102 221 IPR032816 -
Mtr5g1231 260 PANTHER SNARE ASSOCIATED GOLGI PROTEIN-RELATED 17 258 - -
Mtr5g1231 260 PANTHER - 17 258 IPR045014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1231 Mtr-Chr5 12615923 12619310 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1231 - - mtr:MTR_5g029890 511.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1231 5 12615923 12619310 Mtr5g1231 5 12615923 12619310 ECH