Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1213 ATGGACACAAAACTAGCAAAGACATTGGATGGAGCTGCACTCAATAAGAAGCGAGAGCATGCTACCCGATGTGTTGCAGATGATAGCAACGATAAAGTGGGCAGTGAAAATACTGTTGTAGATATTAAGCAAGAGCCAGATGTAAATTTAGATGCTTATACTGAATATGCTTTTGAAAATCTGGATGTGGATTCTGTACAAAGGATGTTTCTTACAGGAATGACTTTTTTGGGCTTTATCGAGTCTGACATAGTTGAGGTTTACCGCAACTCAGGAAAGTCAATGCAAATACGCCTTGATTTATTCAAGATGCAAGTTGATATTACAAAAGAAGTTAAAGGGGATGCTAATGTTCGGTATGCGTGGTTTGCTTCTTCTAAAGAGGAACTATCAACAATGATGGAACATGGATTTAGTCACTATGAACTATCTCCACCCAAATGCTTATATGGCTTTGGTGTTCATCTTGCAACTCTTCCTCACCCTTATGTCTGTTCACTTTTTTGTGATGTTGACGAAAATGGGACTAAATATTTGGTCTTATGCCGTGTCATAATGGAGAATATGGAGCTTCTTCGTCCTAATAGTGATCAAGTTCGTCCAAGTGGTTATGAGTATGATAATGGGGTGGATAACATTCAATGTCCAAAGTACTATGTTGTTTGGAATATAAATATAAACACGCATATCTATCCAGAATTCGTTGTTAGGTTCAAATCCTCTTTGGAAGCTGAAGGTGATGTAACGTTCCTTTAG 756 0.3796 MDTKLAKTLDGAALNKKREHATRCVADDSNDKVGSENTVVDIKQEPDVNLDAYTEYAFENLDVDSVQRMFLTGMTFLGFIESDIVEVYRNSGKSMQIRLDLFKMQVDITKEVKGDANVRYAWFASSKEELSTMMEHGFSHYELSPPKCLYGFGVHLATLPHPYVCSLFCDVDENGTKYLVLCRVIMENMELLRPNSDQVRPSGYEYDNGVDNIQCPKYYVVWNININTHIYPEFVVRFKSSLEAEGDVTFL* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1213 251 SUPERFAMILY ADP-ribosylation 81 242 - -
Mtr5g1213 251 ProSiteProfiles PARP catalytic domain profile. 45 251 IPR012317 GO:0003950
Mtr5g1213 251 Gene3D - 54 242 - -
Mtr5g1213 251 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO1-RELATED 15 246 - -
Mtr5g1213 251 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 15 246 IPR044964 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1213 Mtr-Chr5 12463064 12465371 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1213 - - mtr:MTR_5g029580 513.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1213 5 12463064 12465371 Mtr5g1213 5 12463064 12465371 ECH