Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1172 ATGCAGAAATTGGGGGAATTCAAACTACCTCATTTCTTCAATTACCCACCTTACTTCACTTTGCAGCCAGTAAGGGATACTAGAGAAAAGCAGATACAATTATGGAAAGAACTTATTTTAGATTATTGTAAGACACAGAAGCTTTTTGTGATTGCTCTTGAAGAAGAGTTTCCTCTATTTACAAACACTGTAATTGAAAGATCTCTTACTAATGAAGCTAGAGAAGCGTTTCTTTCGGCTTTAGTTTCCGAGGGACGAGCAGAATGGATGGATAAAGGACATAGAAAATGTCTTATTCTCTGGCATCGGATTCAAGATTGGGCCGACATTTTACTACAGTTTGCAAAAGATAATGGACTGGAAGATGGTGTTGTGACGATAGAGGAAATTCGCTTTGGGACTGAATCTCAAGGAACAGAACTTCACGGGATAGACAGAACTATTTTGAATCGTGCATTGAAATTATTAGAACAGAAGGGGAAGCTTGTGGTCTTCAAAGGAACTTCAACAGATGATGAAGGAATTAAGTTTTCTGTATAA 540 0.3759 MQKLGEFKLPHFFNYPPYFTLQPVRDTREKQIQLWKELILDYCKTQKLFVIALEEEFPLFTNTVIERSLTNEAREAFLSALVSEGRAEWMDKGHRKCLILWHRIQDWADILLQFAKDNGLEDGVVTIEEIRFGTESQGTELHGIDRTILNRALKLLEQKGKLVVFKGTSTDDEGIKFSV* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1172 179 Gene3D - 101 178 IPR036388 -
Mtr5g1172 179 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS25 1 179 IPR008570 GO:0000814|GO:0071985
Mtr5g1172 179 SUPERFAMILY "Winged helix" DNA-binding domain 7 107 IPR036390 -
Mtr5g1172 179 PANTHER - 1 179 - -
Mtr5g1172 179 Pfam ESCRT-II complex subunit 13 145 IPR008570 GO:0000814|GO:0071985
Mtr5g1172 179 Gene3D - 4 100 IPR014041 -
Mtr5g1172 179 SUPERFAMILY "Winged helix" DNA-binding domain 102 177 IPR036390 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1172 K12189 - gmx:100803388 341.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1172 5 11746962 11751146 Mtr5g1172 5 11746962 11751146 ECH