Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1161 ATGAATCGCAACCACGATCCCAATCCTTTCGAAGAAGAAGAAGTCAATCCATTTTCGAATGGTACTGGATCAAAATCACGTGTTCCCTCAGTGGCTTCTGAACCACTAGGCTTTGGTCAAAGACATGATGCTACTGTTGATATTCCTTTGGAGACTTCAAATGGGGACTCCAAGAAAAAAAGTCAAGAGCTAGCAGTGTGGGAAGCTGATTTGAAAAGGAGAGAGAAGGATATAAAAAGAAGGGAAGATTCTGTTGCTAAAGCTGGTGTGCCTGTTGATGATAAGAATTGGCCTCCATTTTTCCCAATCATTCACCATGATATTGCCAATGAGATTCCAGTTCATGCTCAGAGATTGCAATATTCAGCCTTTGCTAGTTGGTTGGGAATCGTTCTCTGCTTAGTTTTTAATGTAGTTGCAGTGATTGTCTGTTGGATCAGAGGCGGGGGTGTTAAAATATTTTTCCTTGCAGTGATTTATGCGCTGCTTGGGATTCCCCTTTCATATGTGCTTTGGTACAGGCCCCTCTATCGTGCTATGAGGACTGATAGTGCACTGAAGTTCAGTTGGTTTTTCATGTTCTACTTGCTTCATATAGCATTTTGCATCTTTGCTGCAATTGCACCTCCAGTTGTTTTTCATGGAAAGTCATTAACGGGCATCCTTGCAGCGATTGATGTGTTCTCAGACCATGTATTGGTTGGGATATTCTATTTGATTGGATTTGGTCTGTTTTGCTTGGAGGCTCTTCTAAGCTTGTGGGTAATTCAGAGAATATACATGTTTTTCCGGGGGCACAAGTGA 804 0.4192 MNRNHDPNPFEEEEVNPFSNGTGSKSRVPSVASEPLGFGQRHDATVDIPLETSNGDSKKKSQELAVWEADLKRREKDIKRREDSVAKAGVPVDDKNWPPFFPIIHHDIANEIPVHAQRLQYSAFASWLGIVLCLVFNVVAVIVCWIRGGGVKIFFLAVIYALLGIPLSYVLWYRPLYRAMRTDSALKFSWFFMFYLLHIAFCIFAAIAPPVVFHGKSLTGILAAIDVFSDHVLVGIFYLIGFGLFCLEALLSLWVIQRIYMFFRGHK* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1161 267 Pfam SCAMP family 95 265 IPR007273 GO:0015031|GO:0016021
Mtr5g1161 267 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 1 267 IPR007273 GO:0015031|GO:0016021
Mtr5g1161 267 MobiDBLite consensus disorder prediction 15 29 - -
Mtr5g1161 267 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN 4 1 267 - -
Mtr5g1161 267 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1161 Mtr-Chr5 11641697 11647910 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1161 1 267 Miscellaneous Gene Families AT1G32050 74.349 2.38e-149 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1161 K19995 - gmx:100780723 468.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1161 5 11641697 11647910 Mtr5g1161 5 11641697 11647910 ECH