Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1138 ATGTCTCAAGAAATTTGCATACTGCCATTCTTCGGACAAGGCCATCTTTTACCATGCTTCCAACTATGCAACCACTTAACTTCCACAAACTTTCACGTCACCCTTCTCATCTCCTCCACCCTTGCCACCTCCATTCCCTCTTCTCTTCATCAACACCCTCTCTTTCAAGTTACCCTGATCCCATCACAACCCCCACCTCCTTCACCAGAACACCACCATGACGAGCTTACTAAAGGGCTCCAAAACATTTTCTCTAACTACCCTCGTCCAACCCGACCCGTTTGTGCCATTGTCGATGTCATGATGAGTTGGTCGAACAATGTTTTCAAGAAATTTGAAATTCCTACAGTGGCATTCTTCACCTCAGGTGCATGCTCTGCCGCCATGGAGCTCGCAGCATGGAAAGCACAACCCTTAGATTTGAAATACGGTGAAATTTGTTTTCTTCCCGGATTACCCTATGACATGGCGCTTACCTACTCTGACCTGAAACAACATCTTCACGACCCTCCTCCTCCTCCTCCTCCTCAACACGGCATTCCTCCACCTCCACATGAATGTGGGCCCAGTATGATGGGTCCACCTAAACTTGGAGGGCAACCACCGTGGCTGGATGAGATACAAGAAACAATAGCATTAATGATCAACACATGTGATGATCTAGAGCACCCATTTATTAACTACATCGCGAACCATGTCAAAAAACCAGTATGTGGTGTTGGACCACTTTTGCCGGGGCAGTATTGGAAATCATCTGGTTCAATTATCCACGATCGTGATTTTAGGTCGAATCGGTTGTCCAACATCACTGAGGAAGAAGTGATCCAGTGGTTAGATTTGAAGCCACGTAGCTCAGTTTTATACGTGTCGTTTGGTACTGAGGTGAGTCCCACAATGGAAGAGTATACGGAACTAGCCCAAGCAATGGAGTCATGTGAGCAGCCATTTATATGGGTGGTTCAAACCGGTAAGGGTAGACCAAGTCCTCCTCGTTTAAGAGGAGAACCCGGTTTAGGAATACCTAAAGCAGAAGGATATTTTCCTCATGGATTGGATAAAAGAGTTGGGAATAGAGGTTTGATAATACGAGGATGGGCACCACAACTGTTGATACTGAGTCACACATCAACAGGTGGATTCTTATCACATTGTGGTTGGAATTCAACGATTGAGGCTATTGGACGTGGGATTCCATTGTTGGCTTGGCCTATAAGGGGTGATCAATACCATAATGCCAAGTTGGTGGTGAGTCGTCTCAGGGTGGGTTATATGGTCTCTAATGATCTATCAGAAAAGGTGGCCAAGGATGAAATAGTTATGGGAATAGAGAGGTTGATGGGTGATGAAGAAATGAAGAAAACTGCTGAGGTTCTTAGTGCTAAGTTTCGGAGTGGGTTTCCAAGAAGTTCATTAGCTGCCTTAGATGCTTTTAAGGATTTTATCAAACAGAGATTTGTTTAG 1461 0.4504 MSQEICILPFFGQGHLLPCFQLCNHLTSTNFHVTLLISSTLATSIPSSLHQHPLFQVTLIPSQPPPPSPEHHHDELTKGLQNIFSNYPRPTRPVCAIVDVMMSWSNNVFKKFEIPTVAFFTSGACSAAMELAAWKAQPLDLKYGEICFLPGLPYDMALTYSDLKQHLHDPPPPPPPQHGIPPPPHECGPSMMGPPKLGGQPPWLDEIQETIALMINTCDDLEHPFINYIANHVKKPVCGVGPLLPGQYWKSSGSIIHDRDFRSNRLSNITEEEVIQWLDLKPRSSVLYVSFGTEVSPTMEEYTELAQAMESCEQPFIWVVQTGKGRPSPPRLRGEPGLGIPKAEGYFPHGLDKRVGNRGLIIRGWAPQLLILSHTSTGGFLSHCGWNSTIEAIGRGIPLLAWPIRGDQYHNAKLVVSRLRVGYMVSNDLSEKVAKDEIVMGIERLMGDEEMKKTAEVLSAKFRSGFPRSSLAALDAFKDFIKQRFV* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1138 486 CDD GT1_Gtf-like 5 460 IPR002213 GO:0008194
Mtr5g1138 486 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 4 481 - -
Mtr5g1138 486 Gene3D Glycogen Phosphorylase B; 1 253 - -
Mtr5g1138 486 MobiDBLite consensus disorder prediction 165 199 - -
Mtr5g1138 486 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 285 459 IPR002213 GO:0008194
Mtr5g1138 486 MobiDBLite consensus disorder prediction 167 190 - -
Mtr5g1138 486 ProSitePatterns UDP-glycosyltransferases signature. 365 408 IPR035595 -
Mtr5g1138 486 Gene3D Glycogen Phosphorylase B; 257 463 - -
Mtr5g1138 486 PANTHER EG:EG0003.4 PROTEIN-RELATED 3 484 - -
Mtr5g1138 486 PANTHER GLYCOSYLTRANSFERASE 3 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1138 Mtr-Chr5 11324888 11326661 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1138 5 461 Glycosyltransferase AT2G15480 24.901 6.28e-47 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1138 - - pvy:116122447 623.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1138 5 11324888 11326661 Mtr5g1138 5 11324888 11326661 ECH