Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1137 ATGTCGTCGAAAGTCGTGTATGAAGGATGGATGGTGAGATATGGCCGGCGAAAAATCGGTCGATCGTTTATTCACATGAGGTACTTCGTTTTGGAGTCACGGTTACTTGCTTATTACAAAAGAAAACCGCAGGATAATCAGGTTCCAATTAAGACACTGCTAATTGATGGAAACTGTAGAGTGGAGGATAGAGGATTGAAGACGCATCATGGACATATGGTATATGTTTTGTCTGTTTACAACAAGAAAGAAAAGAACCATCGGGTTATGCAGATGGCTGCTTTTAACATCCAAGAGGCCCTAATTTGGAAGGAAAAAATTGAGTATGTCATTGATCAGCATCAGGGTGCACAACCGTCAAATGGTAACAAATATATTTCTTTTGAATACAAATCTGGGATGGACAATGGGAAGACGGCTTCTTCCTCGGATCGTGAAAGCCAGTTTAGTGCTCAGGAGGATGAAGATGACGAGCCTCATTCAAATTTGTTAAGGAGGACAACAATTGGAAATGGGCCTCCGGAATCAATTTTTGACTGGACGCGAGAAATAGATTCAGATTTGTCAAATCAGAATGTCAATAACCAAGCTTTCTCAAGGAAGCATTGGCGTCTTTTGCAATGCCAAAATGGACTTCGTGTTTTTGAAGAACTTCTTGAAGTTGATTACCTTCCAAGGAGCTATAGTAGAGCGATGAAGGCAGTGGGAGTTGTGGAGGCCTCTTGTGAAGAAATTTTTGAGCTTGTGATGAGCATGGATGGGACACGGTTTGAATGGGATTGCAGTTTCCAGGAAGGTAGGTTAGTTGAGGAGGTGGATGGGCATACAGCAGTTCTTTATCACCGACTTCAGCTGGACTGGTTCCCAATGTTTGTGTGGCCCCGTGATCTTTGTTATGTACGTTACTGGCGTCGAAATGATGATGGAAGTTATGTTGTTTTATTTCGCTCTAGAGAACATGATAACTGTGGTCCACAACCTGGGTGTGTTCGGGCACATATCGAGAGTGGAGGATATAACATCTCCCCCTTAAAACCTCGAAATGGGAGGCCCAGGACACAAGTTCAGCATCTTATGCAGATTGATCTGAAGGGTTGGGGAGTGAGTTATATACCATCTTTCCAGCAGCATTGTCTCCGCCAAATGTTAAATAGTGTGGCTGGTTTACGTGAATGGTTTGCCCAGTCAGATGAAAGGAATGCTCCTCCACGAATTCCTGTCATGGTTAATATGTTCTCAACATCTGTTACTTCAAAGAAGAGTCAGAAGACAAATGATATTTCTGTTAACTCTACTTCTCTCGATCAAAATGCTGCAAATAGAAATTCTGTTTTGATGGATGAATACTCAGATGACGATGAGGATTTTCAAATAGCAGAACCAGATCAAGATGCATTCCAAATTGGTCAGAGTGATGTTAGAAAAACAGCCTTGGATGAAGAGCCCGATGATGAGATTGACTTATCTTCCTTTTCGGGTAATTTACGCCGAGATGATCGTGATAATGCTCGGGATTGCTGGAAGATATCTGATGGAAGTAACTTTAGAGTCAGAAGCAAGCATTTTTGCTATGACAAGTCAAAGGCTCCTGCAGGAAAACATCTAATGGATCTTGTTGCTGTTGACTGGTTTAAGGACTCAAAAAGAATGGACCATGTGGCTAAGCGTCCTGGTTGTGCAGCACAAGTTGCGTCTGAAAAAGGATATTTCTCCATTATCATCAATGTTCAGGTGCCAGCTTCATCACATTACAGTATGGTATTTTATTTTGTCACCAAGGAGTTAGTTCCTGGAACACTCTTGCAACGCTTTGTTGATGGTGATGACGAATTCCGAAACAGCAGGTTAAAGCTCATCCCATCAGTCCCAAAGGGTTCATGGATTGTACGCCAAAGTGTTGGGAGCACTCCTTGTTTATTGGGAAAGGCAGTTGATTGCAACTATATTCGTGGTCCTAAGTATTTAGAAATTGATGTTGATATTGGTTCTTCTACTGTTGCTAATGGAGTTTTGGGGCTAGTTATTGGTGTGATTACAACACTGGTGGTTGATATGGCTTTTCTTGTACAGGGAAATACTCCTGATGAGTTGCCCGAGAGGCTTATTGGAGCTGTTCGAATTTCTCATTTAGAGCTCAAAACTGCGGTAGACCCAAAACTGGATCCAGATCCATTATGA 2178 0.421 MSSKVVYEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKRKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYNKKEKNHRVMQMAAFNIQEALIWKEKIEYVIDQHQGAQPSNGNKYISFEYKSGMDNGKTASSSDRESQFSAQEDEDDEPHSNLLRRTTIGNGPPESIFDWTREIDSDLSNQNVNNQAFSRKHWRLLQCQNGLRVFEELLEVDYLPRSYSRAMKAVGVVEASCEEIFELVMSMDGTRFEWDCSFQEGRLVEEVDGHTAVLYHRLQLDWFPMFVWPRDLCYVRYWRRNDDGSYVVLFRSREHDNCGPQPGCVRAHIESGGYNISPLKPRNGRPRTQVQHLMQIDLKGWGVSYIPSFQQHCLRQMLNSVAGLREWFAQSDERNAPPRIPVMVNMFSTSVTSKKSQKTNDISVNSTSLDQNAANRNSVLMDEYSDDDEDFQIAEPDQDAFQIGQSDVRKTALDEEPDDEIDLSSFSGNLRRDDRDNARDCWKISDGSNFRVRSKHFCYDKSKAPAGKHLMDLVAVDWFKDSKRMDHVAKRPGCAAQVASEKGYFSIIINVQVPASSHYSMVFYFVTKELVPGTLLQRFVDGDDEFRNSRLKLIPSVPKGSWIVRQSVGSTPCLLGKAVDCNYIRGPKYLEIDVDIGSSTVANGVLGLVIGVITTLVVDMAFLVQGNTPDELPERLIGAVRISHLELKTAVDPKLDPDPL* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1137 725 Gene3D - 203 403 IPR023393 -
Mtr5g1137 725 ProSiteProfiles PH domain profile. 4 112 IPR001849 -
Mtr5g1137 725 Gene3D - 1 122 IPR011993 -
Mtr5g1137 725 SMART PH_update 5 114 IPR001849 -
Mtr5g1137 725 CDD PH 7 107 - -
Mtr5g1137 725 SMART START_1 183 395 IPR002913 GO:0008289
Mtr5g1137 725 MobiDBLite consensus disorder prediction 136 170 - -
Mtr5g1137 725 CDD START 195 371 - -
Mtr5g1137 725 Pfam Protein ENHANCED DISEASE RESISTANCE 2, C-terminal 507 710 IPR009769 -
Mtr5g1137 725 SUPERFAMILY PH domain-like 3 116 - -
Mtr5g1137 725 Pfam START domain 228 371 IPR002913 GO:0008289
Mtr5g1137 725 PANTHER PROTEIN ENHANCED DISEASE RESISTANCE 2-LIKE 4 722 - -
Mtr5g1137 725 ProSiteProfiles START domain profile. 203 385 IPR002913 GO:0008289
Mtr5g1137 725 SUPERFAMILY Bet v1-like 187 382 - -
Mtr5g1137 725 PANTHER ENHANCED DISEASE RESISTANCE-RELATED 4 722 IPR045096 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1137 Mtr-Chr5 11311139 11324397 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1137 - - gmx:100806401 1338.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1137 5 11311139 11324397 Mtr5g1137 5 11311139 11324397 ECH