Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1122 ATGGAAGGGAGAGGATTTTCTGGTTTATACAAGAATTCAAGTGAGGAGTTATTCTTGAAGACAGTGATGGAGAGTCCTATTGGTATGCCGGTACCTACCATGGAGATGTTAGGATTCAAGACTGTTTCTCAAAGCTTTCGCACCGATAGTGAAGAGCTTTTCAAACGCTGGCTAACAAATGATCAAGAGGGATACAATTCATCAAGCATGGGACTTAACAGTCGTTTGTCGAAGAGAATATCAACTGAAATAGCTAATATGTCTAATCAACAACACATTGGTGTGGCTTCAGAAGGAAGAAACAATGATAAATCATGCTTACAAAATAACTTCTTGGCAAATGATGTTTCAAGTGATTTCAATTTTCCAATCAGAGATCCTGTTGATAGAGAATTGCAATCTAGTAACTTGTTTCTGGCCAAGGCCTGGTTTATTACCGATCAACGAATGACAAGAAGCCGGTCTTCTGAATTGCGGTATCACTATCACACCTTGCGAAGGTATACTGAAATGCAAAATTCTCAAGCACCACAAGGATTGGATTCTATGTTCATGGTTCCTGAGCATGATACTAACACTATAAAAGAAGAACTTGCAAATTTTAATGGGTTTGATTACCTTTCCATGTGTGAGTTACCAAGCCAAAAGGGCACATTCATGTCTCCATCCAACTCATCTTCGTCTACCTTCAACACACATCAATTGGTTGATGTAGATAAAGTTTCATCTTGTGTAAGTATGCTAAAAGGTACATTACAGCGCAAGAAACTCGAATGCCAAGTCGAGAAAGAAGCTGCAGAAGATGGCTTGAATGAAATATTTTGCATTCGAGAACCTCTTTTCCAATCAGCTTTTAATGAAGAAGAAAGTTGGAATCAACAAAAGCTAGTAAACGTTCAAGGAGATTTTACCGATCAAGTTAACGATCCCGGAGTCATGCAAACCCTTGAAGGAACCACAAACTTTGTCTTAGATGGTTTTGCAAATCAGACGAACCAAATACAAGGCAGAACAGCTTCTGGAGAACCGTCTCAAAGTGAATCTTCTGCTGCTGCACCAGTAATCTCATCTGGCTTAGATGCATGTGAAGGTCCCAGCAATTCAAATCAAACTCTTGGTGATAGCTCATGGAAACAAGTGGGAGAAAGCACTCAAAATAAAGTCAGAGGTGTCAGAGAACAGATAATGGATAATCTGAAAGATGACAGAAAGAGGAAAAGTCTAGAAAGATATGGATCTGTAACATCAGCTGTTTCAGATGGCAAGATGGATAACACAAAAAAGCGGAGGGTGGAGCGCTCAAGAAAAATGGCTGAAGCAAAGGAAAGAAATTTGACACCAACAATTCCCTCAGATATGCAAGCTATCTTGAAGCGATGCGAAAACCTTGAGAAGGAAGTTCGATCACTAAAGCTTAATTTGTCCTTCATGAATAGGAAGGATTCTGAACAAACAAAGCAGATAGAGGACCTTCAGAAGCAGAATGAAGACTTGGCGGATGAAAAAGAGCGCCTCCTCGAAGAGATTGAAAGAATTCTATCAGAAACTGGAAAGATTTGA 1560 0.3962 MEGRGFSGLYKNSSEELFLKTVMESPIGMPVPTMEMLGFKTVSQSFRTDSEELFKRWLTNDQEGYNSSSMGLNSRLSKRISTEIANMSNQQHIGVASEGRNNDKSCLQNNFLANDVSSDFNFPIRDPVDRELQSSNLFLAKAWFITDQRMTRSRSSELRYHYHTLRRYTEMQNSQAPQGLDSMFMVPEHDTNTIKEELANFNGFDYLSMCELPSQKGTFMSPSNSSSSTFNTHQLVDVDKVSSCVSMLKGTLQRKKLECQVEKEAAEDGLNEIFCIREPLFQSAFNEEESWNQQKLVNVQGDFTDQVNDPGVMQTLEGTTNFVLDGFANQTNQIQGRTASGEPSQSESSAAAPVISSGLDACEGPSNSNQTLGDSSWKQVGESTQNKVRGVREQIMDNLKDDRKRKSLERYGSVTSAVSDGKMDNTKKRRVERSRKMAEAKERNLTPTIPSDMQAILKRCENLEKEVRSLKLNLSFMNRKDSEQTKQIEDLQKQNEDLADEKERLLEEIERILSETGKI* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1122 519 Coils Coil 423 443 - -
Mtr5g1122 519 MobiDBLite consensus disorder prediction 401 441 - -
Mtr5g1122 519 Coils Coil 453 515 - -
Mtr5g1122 519 MobiDBLite consensus disorder prediction 361 386 - -
Mtr5g1122 519 MobiDBLite consensus disorder prediction 335 386 - -
Mtr5g1122 519 PANTHER PROTEIN CYCLOPS 1 518 IPR040036 GO:0005634|GO:0036377|GO:0043565
Mtr5g1122 519 MobiDBLite consensus disorder prediction 422 441 - -
Mtr5g1122 519 MobiDBLite consensus disorder prediction 335 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1122 Mtr-Chr5 11126248 11130883 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1122 - - gmx:100811742 744.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1122 5 11126248 11130883 Mtr5g1122 5 11126248 11130883 ECH