Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1119 ATGGGTAAACCAAATCCACAGAAATCGGGTACCGGCGGCGACCTTCACGCGGCGGCAAGGTCCGGTGATCTGATAGCAGTTCAGTCAATTTTGATTTCAAATCCTCTGGCCGTCAATTCCAGAGATAAGCACTCTAGAACACCACTACATTTAGCAGCATTTTCTGGGCAAACAGAAGTAGTCAGTTACCTCTGCAAGAACAAGGCTGATGTCGGTGCTTCTGCTATGGATGATATGGCCGCAATACACTTCGCGGCACAGAAGGGACATTTAGAAGTTGTTCGAGCTCTGGTTTCAGCTGGTGCCTCTTTCAAAGCCTCTACTCGGAAAGGTGTGACTCCATTACATTTTGCTGTTCAAGGTTCCCATCTGGAACTTGTCAAGTACTTATCCAAGAAAGGGGCAAGTCTCACTATCAAGACAAAGGCAGGAAAGACCCCGTTGGATCTTGCTACCAATGATGAAGTCCGCGCCTTTCTAGAGGGATTTGAAAAGTCAGCTAAGAATGGAGAGTCGAAGAACGAAGATAAAACTGAAGGTTCTGATCCAAAAGAAAACGAAGAATCCGATCCAAAAGCAGCTGAAGAATCTGATCCAAAGGCATCGTCCTCTTTAGGATCCGAAGGTAATTTGAGTTGCGAACCTCCTGCAGCTTCTGTTGATGAAGAAAGTGGTGAGAAAGAGAAGAGGAAGGGTAATGAAGATGATGCAAGGGAAAACTCTTCACATCCGAAAAAGGCGAGAGTTCAACTAAGCCATCTCCAAAGTTCAGATGATGTCCAAGAAGAAGAGACCCTGTAG 801 0.4582 MGKPNPQKSGTGGDLHAAARSGDLIAVQSILISNPLAVNSRDKHSRTPLHLAAFSGQTEVVSYLCKNKADVGASAMDDMAAIHFAAQKGHLEVVRALVSAGASFKASTRKGVTPLHFAVQGSHLELVKYLSKKGASLTIKTKAGKTPLDLATNDEVRAFLEGFEKSAKNGESKNEDKTEGSDPKENEESDPKAAEESDPKASSSLGSEGNLSCEPPAASVDEESGEKEKRKGNEDDARENSSHPKKARVQLSHLQSSDDVQEEETL* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1119 266 MobiDBLite consensus disorder prediction 164 197 - -
Mtr5g1119 266 MobiDBLite consensus disorder prediction 164 266 - -
Mtr5g1119 266 ProSiteProfiles Ankyrin repeat region circular profile. 77 103 - -
Mtr5g1119 266 ProSiteProfiles Ankyrin repeat profile. 110 142 IPR002110 GO:0005515
Mtr5g1119 266 PRINTS Ankyrin repeat signature 45 60 IPR002110 GO:0005515
Mtr5g1119 266 PRINTS Ankyrin repeat signature 93 107 IPR002110 GO:0005515
Mtr5g1119 266 PANTHER - 1 264 - -
Mtr5g1119 266 ProSiteProfiles Ankyrin repeat profile. 77 109 IPR002110 GO:0005515
Mtr5g1119 266 SUPERFAMILY Ankyrin repeat 15 153 IPR036770 -
Mtr5g1119 266 SMART ANK_2a 44 73 IPR002110 GO:0005515
Mtr5g1119 266 SMART ANK_2a 77 106 IPR002110 GO:0005515
Mtr5g1119 266 SMART ANK_2a 110 139 IPR002110 GO:0005515
Mtr5g1119 266 PANTHER ANKYRIN REPEAT PROTEIN 1 264 - -
Mtr5g1119 266 MobiDBLite consensus disorder prediction 220 246 - -
Mtr5g1119 266 ProSiteProfiles Ankyrin repeat profile. 44 76 IPR002110 GO:0005515
Mtr5g1119 266 ProSiteProfiles Ankyrin repeat region circular profile. 110 142 - -
Mtr5g1119 266 Gene3D - 11 184 IPR036770 -
Mtr5g1119 266 Pfam Ankyrin repeats (3 copies) 77 140 IPR002110 GO:0005515
Mtr5g1119 266 Pfam Ankyrin repeats (3 copies) 15 73 IPR002110 GO:0005515
Mtr5g1119 266 ProSiteProfiles Ankyrin repeat region circular profile. 44 71 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1119 8 153 Miscellaneous Gene Families AT1G05640 37.908 2.36e-14 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1119 - - mtr:MTR_5g026800 521.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1119 5 11096802 11099360 Mtr5g1119 5 11096802 11099360 ECH