Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1117 ATGAAATTGAGGACTACAGCATATAATAGACAACAAGGTTTTAGTGCAATGGCAATGGGGGAGTTCACCGGGACCGGGAGCGAGTACGTGACCGTAGGTGAAGTGCCTTCCCCAAGAGCAAATCACATGAGGAAACTTTCAGTTCTACCACTTGTTTTTCTCATCTTCTATGAGGTATCGGGTGGACCTTTTGGTGTTGAGGATACTGTGAAAGCAGCGGGTCCTTTGTTAGCTTTACTTGGATTTTTTGTTTTTCCTTTCATATGGAGTGTTCCTGAAGCTTTGATTACTGCTGAAATGGGTACCATGTTCCCTGAAAATAGTGGTTACGTTGTTTGGGTTTCGTCTGCTTTAGGTCCTTTTTGGGGGTTTCAGCAGGGTTGGATGAAATGGCTTAGTGGCGTGATTGATAATGCTTTGTATCCTGTTCTATTTCTTGATTATCTTAAGTCAGCGGTTCCGGCGGTAGGTGGTGGTTTACCTAGAGTATTTGCAACGTGGGGTTTGACTATAGTTCTTACTTATTTGAACTATAGGGGTTTAACCATTGTTGGACTTGTTGCTGTTTGTTTAGGGATTTTCTCGCTTCTCCCATTTGTTTTCATGGGGTTTTTGTCGATTCCAGACATGAAACCTGAAAGATGGTTTGTTGAGACAAACCTAAATGACGTTGATTGGAATTTATATTTGAATACGCTGTTTTGGAATCTAAATTATTGGGACTCCATAAGTACTCTTGCTGGTGAAGTTGAAAATCCCAAGAAAAATCTTCCCAAAGGTTTGTTTTATGCTTTGATCCTGGTTGTTGTGGCGTACTTCTTTCCTCTTCTGATTGGTACCGGTGCTGTTCCGGTTCAGCGCGAGTTGTGGACTGACGGGTATTTCTCTGAAATTGCTATGATCATTGGAGGAGTGTGGTTGAGATGGTGGCTTCAGGCTGCAGCTGCAATGTCAAACATGGGAATGTTCGTTGCCGAAATGAGCAGCGACTCTTACCAGCTTCTAGGAATGGCTGAGAGGGGAATGTTGCCAGAGTTTTTCACCAAGAGGTCTCGTCACGGAACGCCTCTTATAGGGATTCTTTTTTCAGCCTCTGGTGTAATTCTACTATCATGGCTTAGTTTTCAAGAAATTGTAGCTGCAGAGAATTTCTTGTACTGTATTGGGATGATTCTGGAGTTCATTGCATTCATATTGTTGAAGATCAAACACCCGAATGCCCCTCGGCCTTACAAGGTACCAGGCGGAACGGCCGGAGCAATTATTATGTGCATCCCTCCTACAATTTTGATCTGTGTGGTATTAGCTTTCTCTTCCCTCAAAGTATTTCTTATAAGCATCGTTGCTATGGCAATTGGTATTGTGATGCAGCCTTGTCTCAAATTTATGGAGAAAAAGAGATGGATGAAGTTCTCACACAGTCCTGAGCTACCTGATTTTGTCAATGGAGAGGACACTCAATCTTTGGTGCAATAA 1476 0.4268 MKLRTTAYNRQQGFSAMAMGEFTGTGSEYVTVGEVPSPRANHMRKLSVLPLVFLIFYEVSGGPFGVEDTVKAAGPLLALLGFFVFPFIWSVPEALITAEMGTMFPENSGYVVWVSSALGPFWGFQQGWMKWLSGVIDNALYPVLFLDYLKSAVPAVGGGLPRVFATWGLTIVLTYLNYRGLTIVGLVAVCLGIFSLLPFVFMGFLSIPDMKPERWFVETNLNDVDWNLYLNTLFWNLNYWDSISTLAGEVENPKKNLPKGLFYALILVVVAYFFPLLIGTGAVPVQRELWTDGYFSEIAMIIGGVWLRWWLQAAAAMSNMGMFVAEMSSDSYQLLGMAERGMLPEFFTKRSRHGTPLIGILFSASGVILLSWLSFQEIVAAENFLYCIGMILEFIAFILLKIKHPNAPRPYKVPGGTAGAIIMCIPPTILICVVLAFSSLKVFLISIVAMAIGIVMQPCLKFMEKKRWMKFSHSPELPDFVNGEDTQSLVQ* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1117 491 PANTHER POLYAMINE TRANSPORTER PUT1 10 482 - -
Mtr5g1117 491 Pfam Amino acid permease 51 441 IPR002293 GO:0016020|GO:0022857|GO:0055085
Mtr5g1117 491 PIRSF AA_transporter 26 486 - -
Mtr5g1117 491 PANTHER POLYAMINE TRANSPORTER PUT1 10 482 IPR044566 GO:0022857
Mtr5g1117 491 Gene3D Amino acid/polyamine transporter I 41 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1117 Mtr-Chr5 11086450 11089023 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1117 19 480 Organic Solute Cotransporters AT1G31830 73.448 0.0 703
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1117 - - gmx:100816567 852.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1117 5 11086450 11089023 Mtr5g1117 5 11086450 11089023 ECH