Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1113 ATGGGTTTGCAGGAGGATTTTGAGCAGCATGCCGCCAAAGTCAAGACTTTGACAGAGAGCCCATCAAATGAGGATTTGCTTATCCTTTATGGATTGTACAAGCAAGCCACTGTCGGAAATGTTGACACCGCACGTCCTGGAATGTTCAACATGAGGGACAGAGCTAAATGGGATGCATGGAAGGCTGTTGAAGGGAAATCCAAGGAGGAAGCAATGAGTGATTACATCACTAAGGTGAAACAGCTTCTGGAAGCAGCTGGCGTTGCTGTTTGA 273 0.4689 MGLQEDFEQHAAKVKTLTESPSNEDLLILYGLYKQATVGNVDTARPGMFNMRDRAKWDAWKAVEGKSKEEAMSDYITKVKQLLEAAGVAV* 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1113 90 PANTHER ACYL-COA-BINDING PROTEIN, ACBP 1 89 - -
Mtr5g1113 90 PANTHER BNAA08G07670D PROTEIN 1 89 - -
Mtr5g1113 90 PRINTS Acyl-coA-binding protein signature 4 19 IPR000582 GO:0000062
Mtr5g1113 90 PRINTS Acyl-coA-binding protein signature 21 39 IPR000582 GO:0000062
Mtr5g1113 90 PRINTS Acyl-coA-binding protein signature 44 59 IPR000582 GO:0000062
Mtr5g1113 90 PRINTS Acyl-coA-binding protein signature 65 82 IPR000582 GO:0000062
Mtr5g1113 90 ProSitePatterns Acyl-CoA-binding (ACB) domain signature. 21 39 IPR022408 -
Mtr5g1113 90 ProSiteProfiles Acyl-CoA-binding (ACB) domain profile. 3 88 IPR000582 GO:0000062
Mtr5g1113 90 Pfam Acyl CoA binding protein 4 79 IPR000582 GO:0000062
Mtr5g1113 90 Gene3D - 1 89 IPR014352 -
Mtr5g1113 90 CDD ACBP 3 87 IPR000582 GO:0000062
Mtr5g1113 90 SUPERFAMILY Acyl-CoA binding protein 3 84 IPR035984 GO:0000062
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1113 1 87 Acyl Lipid Metabolism Gene Families AT1G31812 80.460 1.17e-49 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1113 K08762 - gmx:100500327 154.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1113 5 11073032 11075336 Mtr5g1113 5 11073032 11075336 ECH