Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1110 ATGGCAGAACAAGACGAACACGAAGAAATGAGGAAGCTATTTTCATCCTACATAGGTCTAAGCTTCTCTGTCTTCTTAGCGTTGCTTCCAACAAACCTTCGAGAACATTCTCAACGCACCATTCGTGCAGAAGAAGAGCTACGTCAGCTAAAATCACGCCGGCAAGAAGACTACAAAGCAAACGCAAGAGTCGCTGAGATCTTCGCTTCACACAGAAACTCATGGCGCGATGAGGAGAAGCGTCTCTTACGGCGAATCGACGCCGCGTCGGAGGAGATCGTGAGGTTGAGAGCGGTGGTGGAAGATTCTAAGGCGCGTGTGGAGGATCTTGAGCGTGAGGTTGTTGAGAGAGATGAGATGATTGGGTTTATTTCGAGAAGGTTTCAAGAGGAGGAGGGATTGGGTGGGTGCGGGAGTAGGGAAGATATGGTGGGGAACACTGCTGAGGAAGTTGATGTTATCTATCAACAACAACAACAACAGCAGCAGCATAATCAGCATCTTCCTAATGGGTTTGATTCTGAGTTTTCTGGTGGTTCTAAGTTCTGGGCTGAGAAAGCTTCATTATGGCAGGATGTACAATATGAATCCCTTGAATCAATGTATAATACGAAACAGTTTGTAGCAAGAAGGGAGTCCCCCTGGAAGGTAGATGGCGATTCAGCTGGAGTTTCCTCTAAACTTAAACTACTTGAACAGGAATTATTAAATCTGGATAAGATTGGTAAGGATGTTCCGTCCAAGGTATCATCCTCGATAAAGAAGCAGGCAAAGAGATATCAATCACTTTCAGAAAAAATTGACGAGTTATGCAGACGAATAGCTAGTGATCCGTGCGAACCCTCCCTCAGTTCAGAATTTCGAACCCAAACTCAAACAGAGTTTTTACTGGAAGCATTCCGGCTTCAACAGGATGCATCTGAAACTGCACAGAAGCTAATGGCATTGCATACTGAAGTTGGGAAATCCCATTACAAGGATGAGTTGAGAGGGGAGATAACACTAACCACAAGACGGTCTATGGACTCGATTCGGAACAACTTCAGAGAACTCCAGCGAAATCTGGAGATATGGTTGGCCAGAATAATTGGCGATCTTGAGGGGATTCTGGCAAGGGACGGTGCATCTCGTGTAAGAGAATATTACATTTCTAGATATCCTTTTGTTCAATAG 1173 0.4493 MAEQDEHEEMRKLFSSYIGLSFSVFLALLPTNLREHSQRTIRAEEELRQLKSRRQEDYKANARVAEIFASHRNSWRDEEKRLLRRIDAASEEIVRLRAVVEDSKARVEDLEREVVERDEMIGFISRRFQEEEGLGGCGSREDMVGNTAEEVDVIYQQQQQQQQHNQHLPNGFDSEFSGGSKFWAEKASLWQDVQYESLESMYNTKQFVARRESPWKVDGDSAGVSSKLKLLEQELLNLDKIGKDVPSKVSSSIKKQAKRYQSLSEKIDELCRRIASDPCEPSLSSEFRTQTQTEFLLEAFRLQQDASETAQKLMALHTEVGKSHYKDELRGEITLTTRRSMDSIRNNFRELQRNLEIWLARIIGDLEGILARDGASRVREYYISRYPFVQ* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1110 390 Coils Coil 253 273 - -
Mtr5g1110 390 PANTHER EXPRESSED PROTEIN 3 390 - -
Mtr5g1110 390 Coils Coil 33 53 - -
Mtr5g1110 390 PANTHER RIBONUCLEASE P PROTEIN SUBUNIT P38-LIKE PROTEIN 3 390 - -
Mtr5g1110 390 Coils Coil 72 120 - -
Mtr5g1110 390 Coils Coil 341 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1110 Mtr-Chr5 11054601 11058331 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1110 - - mtr:MTR_5g026680 731.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1110 5 11054601 11058331 Mtr5g1110 5 11054601 11058331 ECH