Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1107 ATGGCTTCTTCATCACAGTGTCCACCCTTTGAATTTTCTAGCAAATACTATCATGAAAATGGAGGTGGATGTGTGAGACAAGCAAGTTTCTTTGAAGGCAAACCTGTGCTTAATCAAGGAGTTGGATACTCTATCATCCTTGGTTTTGGTGCTTTCTTTGCTCTCTTCACCTCTTTCTTGGTATGGCTAGAGAAGAGGTATGTTGGGTCCCGGCACACCTCGGAATGGTTCAATACAGCAGGAAGAAATGTTAAGACAGGACTCATTGCTAGTGTCATAGTGTCTCAGTGGACTTGGGCTGCTACAATCCTGCAAAGCTCTAATGTTGCTTGGGAGTACGGGGTTAGTGGACCTTTCTGGTATGCTAGTGGAGCTACCATCCAGGTAATGTTATTTGGAATTATGGCTATAGAGATTAAAAGAAAGGCTCCGTATGCTCATACTGTGTGTGAAATTGTCAAAGCTCGTTGGGGGACTTCGGCACACATTGTGTTCCTTTTCTTCTGCTTCATGACAAATATAATTGTAACGGCTATGTTACTTCTCGGTGGTTCTGCTGTTGTAAATGCATTAACTGGAGTCAACATTTATGCTGCTAGCTTTCTAATACCACTTGGAGTAATTGTCTATACACTAGCCGGTGGACTCAAGGCCACATTCTTAGCAAGCTATATACATTCTGTCATAGTGCATGTTGTTTTGGTCATTTTTGTGTACCTGGTCTATACTTCCAGCAGTGAGCTTGGTAGTCCGAGTGTTGTTTACAATCGCTTGCTCGAAGTTGCAAGCAAAACAAGAACATGCCAAGATCCCATATCACATCATGGGCAATCTTGTGGTCCTGTTAGTGGAAATCACAAAGGCTCTTACTTAACAATGCTCAGTTCAGGTGGCTTAGTTTTTGGGATTATTAACATTGTTGGCAACTTCGGCACCGTGTTTGTTGACAATGGCTATTGGGTGAGTGCTATTGCAGCAAGGCCTTCATCAACTCACAAGGGCTACTTGTTGGGAGGCTTGGTCTGGTTTGCAGTGCCATTTTCTTTGGCTACATCACTTGGTTTGGGAGCACTAGCCCTAGATTTACCACTAAATGAAAGTGAGGCAGGTCGTGGACTTGTCCCCCCAGCTACTGCTGTAGCCTTGATGGGGAAAGGTGGATCCATTCTTCTACTTACCATGCTTTTTATGGCAGTGACTTCTGCTGGTTCATCAGAGCTAATTGCCGTGTCCTCATTATGCACATATGATATCTACAGAACTTACATAAACCCTAATGCAAGTGGAAAGAAAATCCTCAGAGTATCAAGGATGGTTGTCCTAGGGTTTGGATGTTTCATGGGACTGTTAGCAGTTATACTAAACAAAGCAGGAGTCTCTTTAGGATGGATGTACCTTGCAATGGGAGTTTTGATCGGTTCAGCAGTTATTCCTATTGCTTTCATGCTTCTATGGAGAAAAGCAAATGCAATTGGAGCAATTCTTGGAACAGTATTTGGTTGTGTTCTTGGAATAATCACATGGTTGTCTGTTACAAAGATAGAATATGGAAAGATAAACCTTGATACAAGTGGAAGAAATGCACCAATGCTTGCTGGAAACCTTGTTTCTATACTAACTGGAGGAGTTGTTCATGCTGTTTGTAGCATGTTGTGGCCTCAGAACTATGATTGGAGTACTACCAAACAAATTACTGTGGTTGAAAAGGAAAAGACTGATTTGCCAGCGGAAGAGTTTAAAGAAGAAAAGTTAACAAGGGCTAAAGTTTGGATTGTGAAATGGGGTATTGGCTTCACTGTTTTGATAGTTATACTATGGCCTATTCTTTCCCTCCCTGCAGGGGAGTTCAGCAAAGGGTACTTTTTTTTCTGGGCTGTGATTGCTATAGGATGGGGTACTATAGGTTCTGCTGTGATAATTGCTTTGCCAATAATAGAGAGCTGGGATACCATCCAAACTGTTATTCTAGGAATGTTTACAAATGACAGACTCGTGGAAAAGGTGGATGAGTTAAATTTCAAGTTGCATACAATCATACAGGCAATTCCAGAAGCAGAGAGACTTTACTTGCTTGAAAAGGAAAAAACCAAAAAATTAGAAGCCTCAGAGCAACAATCTGTTTCAATTCCTATGTAA 2136 0.4167 MASSSQCPPFEFSSKYYHENGGGCVRQASFFEGKPVLNQGVGYSIILGFGAFFALFTSFLVWLEKRYVGSRHTSEWFNTAGRNVKTGLIASVIVSQWTWAATILQSSNVAWEYGVSGPFWYASGATIQVMLFGIMAIEIKRKAPYAHTVCEIVKARWGTSAHIVFLFFCFMTNIIVTAMLLLGGSAVVNALTGVNIYAASFLIPLGVIVYTLAGGLKATFLASYIHSVIVHVVLVIFVYLVYTSSSELGSPSVVYNRLLEVASKTRTCQDPISHHGQSCGPVSGNHKGSYLTMLSSGGLVFGIINIVGNFGTVFVDNGYWVSAIAARPSSTHKGYLLGGLVWFAVPFSLATSLGLGALALDLPLNESEAGRGLVPPATAVALMGKGGSILLLTMLFMAVTSAGSSELIAVSSLCTYDIYRTYINPNASGKKILRVSRMVVLGFGCFMGLLAVILNKAGVSLGWMYLAMGVLIGSAVIPIAFMLLWRKANAIGAILGTVFGCVLGIITWLSVTKIEYGKINLDTSGRNAPMLAGNLVSILTGGVVHAVCSMLWPQNYDWSTTKQITVVEKEKTDLPAEEFKEEKLTRAKVWIVKWGIGFTVLIVILWPILSLPAGEFSKGYFFFWAVIAIGWGTIGSAVIIALPIIESWDTIQTVILGMFTNDRLVEKVDELNFKLHTIIQAIPEAERLYLLEKEKTKKLEASEQQSVSIPM* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1107 711 ProSiteProfiles Sodium:solute symporter family profile. 42 514 IPR001734 GO:0016020|GO:0022857|GO:0055085
Mtr5g1107 711 Pfam Sodium:solute symporter family 78 500 IPR001734 GO:0016020|GO:0022857|GO:0055085
Mtr5g1107 711 TIGRFAM sss: transporter, solute:sodium symporter (SSS) family 77 500 IPR001734 GO:0016020|GO:0022857|GO:0055085
Mtr5g1107 711 CDD SLC5sbd_DUR3 43 552 - -
Mtr5g1107 711 Gene3D Sodium/glucose cotransporter 66 613 IPR038377 -
Mtr5g1107 711 PANTHER - 23 687 IPR031155 GO:0015204|GO:0016021|GO:0071918
Mtr5g1107 711 PANTHER UREA ACTIVE TRANSPORTER 23 687 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1107 5 698 Organic Solute Cotransporters AT5G45380 78.684 0.0 1122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1107 K20989 - gmx:100784391 1270.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1107 5 11012565 11017700 Mtr5g1107 5 11012565 11017700 ECH