Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1106 ATGATGATGAGGCATGGTGGTGCTATGAACACTGCAATGATGTTTGCAAAGAAGGGTTTATTAGGTGGTGAAGTTGGTGTTCCAAACAAATGGGGTTATTTGGTTAGATCAACCCCTCTTGTAAGGAAAACTAGTACTTTTACTGCTAATCTGTCAGATCAGAAAGACAACAAGAATGTCGACAAAACTCCGCCATCGTCTCAGGGTGGTGCTGGTGATAACAAAGATGAAAAAGGGATTACCAGTTATTGGGGTGTTCAACCTTCTAAAATCACAAAACCAGATGGTACTGAATGGAAATGGAATTGCTTCAGGCCATGGGAGACATACAAAGCAGATGTTACAATTGATCTGACTAAACATCATAAGCCAACAACTTTTCTGGACAAGATGGCTTATTGGACTGTAAAGAGTCTTAGGTGGCCAACTGATATCTTTTTTCAGAGAAGGTATGGATGCCGAGCAATGATGCTTGAGACAGTAGCTGCTGTCCCTGGGATGGTAGGAGGAATGCTGCTTCACTGCAAATCATTGCGCCGATTTGAGCAAAGTGGTGGATGGATCAAAGCATTGCTAGAAGAAGCCGAGAACGAGCGCATGCATCTAATGACTTTCATGGAAGTGGCAAAACCAAAGTGGTATGAACGTGCTCTGGTCATAACTGTCCAAGGTGTTTTCTTCAATGCTTATTTCTTAGGCTATTTGCTCTCACCAAAATTTGCACACCGTATGGTTGGTTACCTTGAGGAGGAAGCTATTCACTCATACACTGAGTTTCTCAAGGAACTTGATAAAGGCAACATCGAAAACGTTCCTGCTCCAGCTATTGCTATTGACTATTGGCAGCTTCCCCAAAACTCTACTTTAAGGGATGTTGTAGAGGTTGTCAGAGCTGATGAAGCACATCATCGCGATGTTAACCATTTTGCTTCGGATATACATTACCAAGGACGAGAGCTACGGGAGGCTGCTGCTCCAATTGGTTATCACTAG 993 0.43 MMMRHGGAMNTAMMFAKKGLLGGEVGVPNKWGYLVRSTPLVRKTSTFTANLSDQKDNKNVDKTPPSSQGGAGDNKDEKGITSYWGVQPSKITKPDGTEWKWNCFRPWETYKADVTIDLTKHHKPTTFLDKMAYWTVKSLRWPTDIFFQRRYGCRAMMLETVAAVPGMVGGMLLHCKSLRRFEQSGGWIKALLEEAENERMHLMTFMEVAKPKWYERALVITVQGVFFNAYFLGYLLSPKFAHRMVGYLEEEAIHSYTEFLKELDKGNIENVPAPAIAIDYWQLPQNSTLRDVVEVVRADEAHHRDVNHFASDIHYQGRELREAAAPIGYH* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1106 330 Gene3D Alternative oxidase 84 326 IPR038659 -
Mtr5g1106 330 MobiDBLite consensus disorder prediction 46 79 - -
Mtr5g1106 330 PANTHER ALTERNATIVE OXIDASE 48 330 IPR002680 GO:0009916
Mtr5g1106 330 Pfam Alternative oxidase 119 310 IPR002680 GO:0009916
Mtr5g1106 330 CDD AOX 147 314 IPR002680 GO:0009916
Mtr5g1106 330 PANTHER UBIQUINOL OXIDASE 48 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1106 Mtr-Chr5 11003007 11006223 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1106 54 330 Miscellaneous Gene Families AT3G22370 86.786 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1106 K17893 - gmx:547924 519.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1106 5 11003007 11006223 Mtr5g1106 5 11003007 11006223 ECH