Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1066 ATGTTTAGAATGAAGAAAGGACTAGCTTGCTGCAGCAGAGGGAAGAAAATCAGCATTGATTTTCATGACCATGAGAGAATTATGACATATAATGGCCTTGAGAGTTGCATTCTAAACAATCAGTCTTATGAAGAAGAAAGCAGAACAAGTAGAGGAGACGGAGGCATAACCGATTCATTTGATGACGATGATTCAAGCTGTTCTTCAAGCAAAGATGCGTTTGGATCATTCTCTTCAAAGTGTTTAACAATGAAAAGGGAGGATGAACAAGGACTTGAGGAATGGGAACTCTCAGAAAGTCCGCAACATTTTCATGTCAAAGAGAAACCTTCTTATGCAATCCAACATTCAGATATTGAAGCCATGAAGGAAAATTTTTCAAAGCTCTTACTTGGTGAAGATGTTACTGGAGGAACTAAGGGCATTACTACAGCTTTGGCACTGTCTAATGCCATCACAAACTTATCAGTTACTGTTTTTGGTGAGCTATGGAAATTGGAACCGCTATCTGAAGAAAGAAAGAGCAAATGGCGAAGAGAAATGGACTGGTTACTGTCTCCTACTAACTATATGGTTGAGCTAGTTCCTGCTAAGCAAAACAATGCCAATGGTAGAATCTTTGAGATAATGACGCCTAAAGCTCGTGCAGACATTCACATGAATCTTCCAGCACTCCAGAAGTTGGACTGTATGCTTATCGATGCACTTGATTCAATGGTGAAAACAGAGTTCTGGTATGGAGAGGGAGGAAGCCGGACTGAAGGGAAAGACATGAGTGTGCGGCATAGTAAAAGATGGTGGCTTCCCTCACCTCAAGTACCAAAAACTGGGCTTTCTGATACCGAAAGAAAGAGGTTGGTTCATCAGGGGAAGGTGGTACGCCAAGTATTCAAGGCTGCCAAATCTATCAATGATAATGTGTTGCTTGAAATGCCTGTGCCAATGGTTATTAGAGATGCACTTGCAAAGTCTGGAAAGGCAAACCTTGGACAAGAACTGCACAAGGTTTTGACAGCTGAATCAACTTCTGGAGAAGACATGATTAAATCTCTCAATTTAAAATCTGAACATATGGCCCTTGAGACCATTAATAAATTGGAAGCTGTTATATTCTCGTTGAAAGAGAGAACTATGGAACAAGTCACTGGCAAATCACCGGTTCGAACCTCATGGTCTTTTGTGAAGGGCCCTATGTCAGAAGCTGATAAATTGGAGTTATTATTGGACCGTGCTGAAACACTTTTACAGCTGCTTAAAATCAGATATCCTAATCTTCCTCAAACATTTCTTGATGCTGCTAAAGTTCAATATGGCAAGGATATTGGACATTCCATTATGGAAGCTTATTCAAGAGTTCTTGGAAATTTAGCCTTCAGCATATTGTCTAGAATAGGAGATATATTACAAGAGGATTGTCTAAGCAGTTCTAACTCACTAAGTTGCTCCCCTGGAATAAATATCTCTGAAACTTGGATGGTGGATTCACATATTAAGCAATCCTTACTTCAAAAGATAAACAAAGCAGATGGAAAATGTTGTGACAGTACTTCAGATTTAGAACTCAAATCATTTGATGCTAAATCCAAAGATGTGATAATAGCTACACCAAACAGGAGTAGTGTCTGGTGCATTAGTAGAGAGGCTTGTACAAGTGTGTCTACTCAAAATTCGCCATAG 1677 0.3965 MFRMKKGLACCSRGKKISIDFHDHERIMTYNGLESCILNNQSYEEESRTSRGDGGITDSFDDDDSSCSSSKDAFGSFSSKCLTMKREDEQGLEEWELSESPQHFHVKEKPSYAIQHSDIEAMKENFSKLLLGEDVTGGTKGITTALALSNAITNLSVTVFGELWKLEPLSEERKSKWRREMDWLLSPTNYMVELVPAKQNNANGRIFEIMTPKARADIHMNLPALQKLDCMLIDALDSMVKTEFWYGEGGSRTEGKDMSVRHSKRWWLPSPQVPKTGLSDTERKRLVHQGKVVRQVFKAAKSINDNVLLEMPVPMVIRDALAKSGKANLGQELHKVLTAESTSGEDMIKSLNLKSEHMALETINKLEAVIFSLKERTMEQVTGKSPVRTSWSFVKGPMSEADKLELLLDRAETLLQLLKIRYPNLPQTFLDAAKVQYGKDIGHSIMEAYSRVLGNLAFSILSRIGDILQEDCLSSSNSLSCSPGINISETWMVDSHIKQSLLQKINKADGKCCDSTSDLELKSFDAKSKDVIIATPNRSSVWCISREACTSVSTQNSP* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1066 558 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 20 549 IPR038937 GO:0005085
Mtr5g1066 558 Coils Coil 401 421 - -
Mtr5g1066 558 Gene3D PRONE domain, subdomain 1 111 348 - -
Mtr5g1066 558 Gene3D PRONE domain, subdomain 1 349 481 - -
Mtr5g1066 558 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 117 474 IPR005512 GO:0005085
Mtr5g1066 558 MobiDBLite consensus disorder prediction 47 68 - -
Mtr5g1066 558 MobiDBLite consensus disorder prediction 47 73 - -
Mtr5g1066 558 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 14 20 549 - -
Mtr5g1066 558 ProSiteProfiles PRONE domain profile. 109 481 IPR005512 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1066 Mtr-Chr5 10634054 10642502 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1066 - - gmx:100818685 864.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1066 5 10634054 10642502 Mtr5g1066 5 10634054 10642502 ECH