Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1054 ATGCCTTCCCCCCATAACATTAATCAAGACCATGAGGCTCATCATCTTGATCGTCCTCAACCTCAACCTCAACCTACTCATCAACTTCGTCATAGAACACCCAAAAAAAGACTAGTAACACATCAAAATGGTAACACCAACATCTTTATTTGGCTATTGGCAATTCTATGCACAATAATAGCCATAGGAGTTGTAATTGGAGGTGTAGTAGTCTTTATTGGTTACATAGTAATTCATCCAAGAGTCCCTACAATAAGCATAGCAAATGCTCATTTAGATCTTTTCAGAAATGACTATGCTGGCCTTCTTCAAACACAAGTAAACATCCGTGTCATGGCGAAAAATGGTAATTTTAAGGCACATGCAACATTTTCTAATATAAAACTGAAACTTAGCTATGAAGGACAAGGTATAGCTTTTATGGTTGCTGACCCTTTTGATGTTCCTAAGAATAGTTCTAGGTATTTGGATTATGTTGTTCAATCTTCTTCTATTCCTTTGACTCCTGATCAGATTGAGGATGTTGATGATACATGGAAGAGAAATATTGTTGGGTTTGATTTGAAGGGTGATGCTAGAACTCAATGGAGAATTGGACCGTTTGGTTCTTTTAAATTCGGGTGTAAACTTGAGTGTCAACTTAAATTTCATCCTCTTAATGGTAGTTATATTCCTTCACGTTGCACTTCTCAATCCAAATGA 702 0.3661 MPSPHNINQDHEAHHLDRPQPQPQPTHQLRHRTPKKRLVTHQNGNTNIFIWLLAILCTIIAIGVVIGGVVVFIGYIVIHPRVPTISIANAHLDLFRNDYAGLLQTQVNIRVMAKNGNFKAHATFSNIKLKLSYEGQGIAFMVADPFDVPKNSSRYLDYVVQSSSIPLTPDQIEDVDDTWKRNIVGFDLKGDARTQWRIGPFGSFKFGCKLECQLKFHPLNGSYIPSRCTSQSK* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1054 233 MobiDBLite consensus disorder prediction 1 35 - -
Mtr5g1054 233 Pfam Late embryogenesis abundant protein 112 212 IPR004864 -
Mtr5g1054 233 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 28 233 - -
Mtr5g1054 233 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 28 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1054 Mtr-Chr5 10526293 10530806 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1054 - - cam:101493278 355.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1054 5 10526293 10530806 Mtr5g1054 5 10526293 10530806 ECH
Mtr5g1054 5 10526293 10530806 Mtr8g2265 8 32910964 32919295 PCT