Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1050 ATGGAAACTCCTCCTAAATGCAAAGATGCATTGATTCTCTCCATCATCATCTCTATCTTTCTTGGCTTGGTTTCATTCACTCTATGTATAGCGTCGGAAATTACGAAGAACAAGATGGATGATCTTAGATGGAATGGAAAACTATGTTATTTGCCATCAAGCCAAGCATATGGATTGGGTATTGCAGCTTTGGTTTGTTTGTTTTTGGCTCAAATTATTGGTAATTCTATGTTGTTCAAGAATTCTTGTTCAAGAAGGAAAAAAAATGCACAATACAAGCTACCTTTCTTTGCAAGGCTCCTAATTTTGATATCTTGGCTTAGCTTTGGAGTTACAGTTATTTTACTAATTGTTGCAACAAGCATGAGCAAAAGGCAGCCCTATGGGGCAGGTTGGTTGAATGGTGAATGCTATTTAGTCAAAGGAGGAACTTACGCAGGCTCAGCCATATTGATTCTAGTTACAATAGGCTCAGCAATTGGTTCATCTTTTTCAACAATAAAAATTAATCAAGCAGAACAAGATCGCAAAATACATGCACAAATGGGGTAA 552 0.3696 METPPKCKDALILSIIISIFLGLVSFTLCIASEITKNKMDDLRWNGKLCYLPSSQAYGLGIAALVCLFLAQIIGNSMLFKNSCSRRKKNAQYKLPFFARLLILISWLSFGVTVILLIVATSMSKRQPYGAGWLNGECYLVKGGTYAGSAILILVTIGSAIGSSFSTIKINQAEQDRKIHAQMG* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1050 183 Pfam Protein of unknown function (DUF1218) 63 156 IPR009606 -
Mtr5g1050 183 PANTHER OS07G0462200 PROTEIN-RELATED 9 167 - -
Mtr5g1050 183 PANTHER PROTEIN MODIFYING WALL LIGNIN-1 9 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1050 Mtr-Chr5 10465227 10467539 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1050 - - gmx:100500694 243.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1050 5 10465227 10467539 Mtr5g1050 5 10465227 10467539 ECH
Mtr5g1050 5 10465227 10467539 Mtr8g2268 8 32958974 32960439 PCT