Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1049 ATGCCTTATTCTGTGTCTGTGACTACTGATGCATCTAACACACCTTCATTTTGTTCACCTCTACAAGACATAAATTCTGTGGAAGGTCGAATAACTGGAAAGATTCGTCCTTACCCAAGTCCAATTTCTCCTCAATATTCTGTCCATAATCGTGGTTCTTCAATTGTGGATTCTACTTTAGGTCCCTTTCTAACACCTCAATCTTTGTTAACTTCTGATCGATTTGCACATCCTAGAGAATGGTTATTAGCACAAAATTTGAACCCTAATTGGAAGGATATGGGTTCACTGCCTCTAACTTCCTCTGTACCAATGCCTTCTCCAGCATTTCAATCACCATTGGAGCATCTACCAACCTCCGTGCACAAGGCTCAATACCCAAGTCCACAGTTTACTGAAGAGTTTGATTTTGTGGCTATGAATGAAAAGTTCAAAAAGGACGAGGTATGGAATTCTATTGCAAAGGCAACCACAAAAATAGAGGGATTGGAAGACATTGAGTTTCTCAATTTGGGTGAACGAGAATGTCACAAATTAAAGTCTGCATACAAAAAAGATGACTTTTTTGACACAATTTCTTCTAACTCTATGACTCGTGGATCAAGGAATCGTTTATCTGCAAGAACAAAACAGGATACTGAGAGATTTGGCAATTTCCATCAGAGGCCTAATGCAGGTTATGGTGATTATGGCGCTGGACGCGGTGAGAATTTCAGGGGCTATTTGGGAAGGGGTTATGGTTATGGCGGGAGAGGGCATGGACCAAACTTCCCTTTCTAG 780 0.409 MPYSVSVTTDASNTPSFCSPLQDINSVEGRITGKIRPYPSPISPQYSVHNRGSSIVDSTLGPFLTPQSLLTSDRFAHPREWLLAQNLNPNWKDMGSLPLTSSVPMPSPAFQSPLEHLPTSVHKAQYPSPQFTEEFDFVAMNEKFKKDEVWNSIAKATTKIEGLEDIEFLNLGERECHKLKSAYKKDDFFDTISSNSMTRGSRNRLSARTKQDTERFGNFHQRPNAGYGDYGAGRGENFRGYLGRGYGYGGRGHGPNFPF* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1049 259 ProSiteProfiles FFD box profile. 181 196 IPR025761 -
Mtr5g1049 259 PANTHER DECAPPING 5-LIKE PROTEIN-RELATED 4 250 - -
Mtr5g1049 259 ProSiteProfiles DFDF domain profile. 123 159 IPR025762 -
Mtr5g1049 259 PANTHER SCD6 PROTEIN-RELATED 4 250 - -
Mtr5g1049 259 Pfam FDF domain 130 217 IPR019050 -
Mtr5g1049 259 SMART FDF_2 129 220 IPR019050 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1049 K18749 - gmx:102669894 301.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1049 5 10462686 10465024 Mtr5g1049 5 10462686 10465024 ECH