Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1042 ATGACCTTTTCAGACGACGAAGACGAAAATCTAGCTCAATTTCTCGAATCAGAAGTCCTCTCCGAGGTCTCTGACAAGGAAGAGGTAAATGTAGAGGAACCTAAAGCGAAGAGAAAACGCACAGACGAGGTTGATAGTAGTAAACAGAGCACCATACAGTGTTCTGGTTCATCATCTAAGCCTAAGAACTATGGTGCCAATAATGCCATGGTACCGAGAAGGATTGAAACTGGTTTTTTCAGCAAAGTTCCACCAGAACTTTTCCATCATATCCTTAAATTTTTGTCGTCTGAGGACCTTATTTCTTGTTCTTTAGTCTGTAGTTTTCTAAGTTGTGCTGCATCTGATGAAGCGTTGTGGCGTCGCTTGTATTGTATGCGATGGGGCCTTCTTCCCCCGACGAGGAAGATAAGGGACTGCCCATGGAAAAAGCTATACATTCAGCGTGATGAAAATGACATGGTTGAACTTGTCACAAGCTGCCAAAATGAGTTTAAGGAATACTATATTCAAATGCAAGCAGCTAAGAGAAGTCAAGCACCTCATCCTTCACAGTTGAAGGATGATAGCATAATTCTCGACAAAACCTTAGCTGATCAAGTCTCATCATGGAAAAGTAGCAGGGGCCTCAGTGATACAGTGGTGAATGACCATGCTTGTTCTGGGAAGACATGCTCGTACTACCAAATTGGAGATGTTTTTATTTGTGAGAAGACTGGACAAGTTCATGTTTGCGATGAAACTTGTAAAGAAGTGGTTATGGATCCCGAGGATGAGCTTTTGGTCTGTACAATATCAGGGCACTGTTTTGATAGATTATTATCGCCATCTGAAATGGAGCCCGACTCTGAGCAGCAGCAAGGTGTTGCAGCTGATGAGGAAGAACCATTTATGGGATCTGGCCGTTTTGCGCGAGCTTATTTGCTGGGATACAATTGTGCTGATGAAAAGGAGCTTGAAGATACTTTGAGGTATTGCTGA 981 0.4281 MTFSDDEDENLAQFLESEVLSEVSDKEEVNVEEPKAKRKRTDEVDSSKQSTIQCSGSSSKPKNYGANNAMVPRRIETGFFSKVPPELFHHILKFLSSEDLISCSLVCSFLSCAASDEALWRRLYCMRWGLLPPTRKIRDCPWKKLYIQRDENDMVELVTSCQNEFKEYYIQMQAAKRSQAPHPSQLKDDSIILDKTLADQVSSWKSSRGLSDTVVNDHACSGKTCSYYQIGDVFICEKTGQVHVCDETCKEVVMDPEDELLVCTISGHCFDRLLSPSEMEPDSEQQQGVAADEEEPFMGSGRFARAYLLGYNCADEKELEDTLRYC* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1042 326 Pfam F-box-like 82 125 IPR001810 GO:0005515
Mtr5g1042 326 SUPERFAMILY F-box domain 70 149 IPR036047 GO:0005515
Mtr5g1042 326 MobiDBLite consensus disorder prediction 47 65 - -
Mtr5g1042 326 Gene3D - 67 154 - -
Mtr5g1042 326 MobiDBLite consensus disorder prediction 25 67 - -
Mtr5g1042 326 ProSiteProfiles F-box domain profile. 77 123 IPR001810 GO:0005515
Mtr5g1042 326 SMART fbox_2 83 123 IPR001810 GO:0005515
Mtr5g1042 326 MobiDBLite consensus disorder prediction 25 46 - -
Mtr5g1042 326 Pfam UL92 family 224 287 IPR004289 -
Mtr5g1042 326 PANTHER F-BOX ONLY PROTEIN 3 70 269 - -
Mtr5g1042 326 PANTHER F-BOX ONLY PROTEIN 3 270 326 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1042 - - gmx:100778591 567.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1042 5 10392632 10396383 Mtr5g1042 5 10392632 10396383 ECH