Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1028 ATGGTCCCTAAACCCATCATAATAACAAGTAAACAACCACCAACAACTTCTTCTATCCCTCCATTCAACATCTCATCCATCAAAACCAAAGAAAAACCCCAAACATCACAATCACAGACACTAAAAACCACCACCACTACACCCCCCACAAAAACTCTTCCTACACCTCCCACCATCACCACCACCCATAACCTCAAAAAACCACAAACATCGTCACTCCCAGCACTACTATTCAACACATTCGACGACATCATCAACACCTTCATAGACCCACCAATAAAACCATCCGTAGATCCAAGACATGTTTTGTCCCAAAACTTTGCACCAGTCCTTGACGAACTCCCTCCAACACAATGCAAAGTCATTAAAGGCACACTTCCACCGTCACTTAACGGTGTTTACATAAGAAACGGACCAAACCCACAGTTCCTTCCACGTGGACCCTACCACCTCTTCGACGGTGATGGCATGCTTCACGCCATTACAATCTCAAACGGAAAAGCTACACTCTGTAGCCGTTACGTTCAAACTTACAAATACAAAATCGAAAACGAAGCTGGTTACCAACTTATCCCAAACGTGTTTTCTGGTTTCAACTCGCTTATAGCTTCTGCTGCACGTGGCTCTGTCACCGCAGCACGTGTCATATCTGGACAATACAATCCTTCTAACGGCATTGGTTTAGCCAACACAAGTTTGGCTCTGTTTGGTAACAAACTTTTTGCTTTAGGAGAATCAGATCTTCCTTATGAAATCAATCTTACGCCAAACGGTGATATCCAAACAATTGGCCGTTATGATTTTAACGGTAAACTCTCCATGAGTATGACTGCACATCCGAAAATTGACGGCGACACAGGTGAAACTTTTGCTTTCCGTTACGGTCCTATGCCACCATTTTTAACCTATTTCCGTTTTGATGCAAATGGTGTTAAACATAACGACGTTCCGGTTTTCTCCATGACAAGACCTTCTTTTCTTCATGATTTCGCCATTACTAAAAAATACGCTGTGTTTACGGATATTCAGCTTGGAATGAATCCTCTTGACATGATTTCCGGTGGTTCTCCGGTAGGTTCCGATCCTTCAAAGGTTTCAAGGATCGGAATTCTACCGAGATATGCTAGTGATGAGTCGAAGATGAAATGGTTTGATGTGCCAGGGTTTAATATTATGCACGCGATAAACTCATGGGATGGGGAAGATGATGAGGAAACTGTGACACTAATTGCTCCAAATGTTCTCTCCATTGAGCATACGATGGAGAGACTTGAGCTAGTTCATGCAATGATTGAGAAGGTAAAGATAAATATTAAAACTGGGATTGTATCAAGACAACCATTATCGGCGCGAAACCTGGATTTCGCGGTGATAAATGGTGATTATATGGGGAAGAAGAATAGGTTTGTTTATGCGGCAATTGGGAATCCAATGCCGAAGATTTCTGGGGTGGTGAAGATAGATGTGTTGAAAGGGGAGGAAGTTGGGTGTAGGTTGTATGGAGAGGGTTGTTATGGTGGTGAGCCGTTTTTCGTGGCGAGGGAGGATGGTGAAGAAGAGGATGATGGTTATTTAGTGAGTTATGTGCATGATGAGAAAAAGGGAGAGTCTAAGTTTTTGGTGATGGATGCTAAGTCGCCGGAGTTTGAGATTGTGGCGGAAGTGAAGTTGCCAAGGAGGGTGCCTTATGGTTTTCATGGATTGTTTGTGAAAGAGAGTGACATCACCAAGTTGTCGGTGTCGTAG 1746 0.4324 MVPKPIIITSKQPPTTSSIPPFNISSIKTKEKPQTSQSQTLKTTTTTPPTKTLPTPPTITTTHNLKKPQTSSLPALLFNTFDDIINTFIDPPIKPSVDPRHVLSQNFAPVLDELPPTQCKVIKGTLPPSLNGVYIRNGPNPQFLPRGPYHLFDGDGMLHAITISNGKATLCSRYVQTYKYKIENEAGYQLIPNVFSGFNSLIASAARGSVTAARVISGQYNPSNGIGLANTSLALFGNKLFALGESDLPYEINLTPNGDIQTIGRYDFNGKLSMSMTAHPKIDGDTGETFAFRYGPMPPFLTYFRFDANGVKHNDVPVFSMTRPSFLHDFAITKKYAVFTDIQLGMNPLDMISGGSPVGSDPSKVSRIGILPRYASDESKMKWFDVPGFNIMHAINSWDGEDDEETVTLIAPNVLSIEHTMERLELVHAMIEKVKINIKTGIVSRQPLSARNLDFAVINGDYMGKKNRFVYAAIGNPMPKISGVVKIDVLKGEEVGCRLYGEGCYGGEPFFVAREDGEEEDDGYLVSYVHDEKKGESKFLVMDAKSPEFEIVAEVKLPRRVPYGFHGLFVKESDITKLSVS* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1028 581 PANTHER BETA-CAROTENE DIOXYGENASE 20 576 IPR004294 GO:0016702
Mtr5g1028 581 MobiDBLite consensus disorder prediction 1 67 - -
Mtr5g1028 581 Pfam Retinal pigment epithelial membrane protein 107 571 IPR004294 GO:0016702
Mtr5g1028 581 PANTHER CAROTENOID CLEAVAGE DIOXYGENASE 4, CHLOROPLASTIC-RELATED 20 576 - -
Mtr5g1028 581 MobiDBLite consensus disorder prediction 9 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1028 Mtr-Chr5 10274583 10276747 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1028 K09840 - gmx:100777875 864.374
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1028 5 10274583 10276747 Mtr5g1028 5 10274583 10276747 ECH