Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1016 ATGGAAGAGACTATTCCAGTGATTGATCTTGAGAAGATTTCAGAGCAATCCGAATGCCAAAAACTAAGAGAAGCATGTGAAAGATGGGGTTGTTTCAGAATCATCAACCACTCTATTCCTTCCACCCTTATGTCTGATATGAAGATCGTTGTTCAAGCTCTTCTTGATCTTCCTATGGATATCAAGAAAAACAACAAAGATGTCATTGCTGGTAGTGGTTACATGGCACCAAGTGCTGTCAATCCTCTCTATGAAGCTTTAGGCCTCTATGATTTAGGTTCTTCACAAGCTGTGCATGAATTCTGCTCTCAATTGAATGCCACACCTCATCAAAGGGAAATAATGGAGGCATATGGCAAAGCAATACATGATTTGGCAGTCAAAATAGGACAAACGATGGCTGAATCACTGGGCATAGGTAGTGCTGATTTTGAGGACTGGCCTTGCCAGTTCAGAATTAATAAATATAGCTTCACCCAAGAATCTGTAGGGTCCCCTGGAGTCCAATTACACACAGATTCAGGGTTCCTAACAATTCTTCAAGACGATGAAAATGTTGGCGGTCTTGAAGTGATGGACAGTTCTGGATCATTTGTTTCAGTCCCACCATTTCATGGAACCCTCCTTGCCAATCTTGGAGATATTGCTAAAGTATGGAGCAATGGAAGGTTTTACAATGTAAAGCACCGTGTACAATGCAAGGAAGCTACCACACGCTTTTCAATTGCTACATTCATGTTGGGACCGAGGAAGGGAAATGTTGAGGTTCCAACAGAGGCGGTGGACCATGATCACCCACGTCTATATAAACCTTTTGTTTATGATGATTATAGAAAGCTCAGAGTTTCGAAAAAGATGCACACTGGTGAAGCCCTTGAGCTATTACGCTTGGCGTAA 897 0.4203 MEETIPVIDLEKISEQSECQKLREACERWGCFRIINHSIPSTLMSDMKIVVQALLDLPMDIKKNNKDVIAGSGYMAPSAVNPLYEALGLYDLGSSQAVHEFCSQLNATPHQREIMEAYGKAIHDLAVKIGQTMAESLGIGSADFEDWPCQFRINKYSFTQESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDSSGSFVSVPPFHGTLLANLGDIAKVWSNGRFYNVKHRVQCKEATTRFSIATFMLGPRKGNVEVPTEAVDHDHPRLYKPFVYDDYRKLRVSKKMHTGEALELLRLA* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1016 298 Pfam 2OG-Fe(II) oxygenase superfamily 150 246 IPR044861 -
Mtr5g1016 298 Gene3D - 2 294 IPR027443 -
Mtr5g1016 298 Pfam non-haem dioxygenase in morphine synthesis N-terminal 5 76 IPR026992 -
Mtr5g1016 298 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 3 296 - -
Mtr5g1016 298 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 3 296 - -
Mtr5g1016 298 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 147 249 IPR005123 -
Mtr5g1016 298 SUPERFAMILY Clavaminate synthase-like 4 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1016 Mtr-Chr5 10170848 10173527 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g1016 5 297 Glycosyltransferase AT5G59530 25.080 9.82e-22 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1016 K23947 - gmx:100783059 502.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1016 5 10170848 10173527 Mtr5g1016 5 10170848 10173527 ECH