Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1009 ATGGGATTTCTAGAGCTATTTTCTGTTGCTTCTTTCCCTGTGATCAAAGTACTACTAGTCACTGGAATTGGTCTACTTCTTGCACTTGATAACATTAATTTGTTGGGAAAAGATGCAAGGAATCAAACCAATCATCTTGTACATTATGTGTTCAATCCTGGTCTGATTGGTGGTAATTTGGCACAAACAATCACTTTAGATAATGTTGTTTCTTTGTGGTTCATGCCAGTGAACATATTGGTTACATTTTTGTTAGGCTCAGCCTTAGGATGGATTATTATCAAACTCACAAAGCCTCCTAGACACATAGAAGGTCTCATAGTAGGTGTCTGTTCTGCAGGAAATTTAGGAAACTTGCCTATAATAATTATTCCAGCTATATGCAAAGACAAAGGTAGTCCTTTTGGAGATCCTGATGTATGCTATCAATTTGGGATGGCTTATGCTTCACTTTCTATGGCAATTGGAGCTGTTTTTATATGGACTTACGTGTACAACATAATGCGGATTTCTTCAAGAAATGTTCACAAAGAATGTAACAAAAGTAGTGATTCCATCACCTTGGAGGATTCAAGGGATGTATCACAATCAATCATAGAGGAAGGCTCTGAAAATTATACAAGTCCAACAAAAGGCAATGTGGATGATGCATACACCCTATTGCTTTCTAAGAATGAGTCTGAGCAGAAAATTAAGGTGCCAGTCTTTGATAAAATTAAGCATAAATTTGGAATGATTTTAGGCAACCCAAATTTCAGAGGCATATTTTCACCAGCAACTCTTGGGGCGATTGTTGGATTTATTGTTGGTGTAGTTCCTTGGTTACGTAGGTTAATGATTGGAAGCAATGCTCCTCTTCATGTGATTGAAGACTCTGCTTCCATGTTGGGTGATGCTGCCATTCCAACAATAACCCTTATAATGGGTGCCAACCTTCTTAGAGGATTGAAGGGAGCAAGTACTCCATTTTGGACAATTATAGGAATCATAGTAGTTCGATATATCTTGCTCCCAATTTTTGGAGTTCTAATTATTAAAGGTGCAACACATTTGGGTTTGGTGCAAATAGATCCCTTATATCAGTTTGTACTTCTCCTTCAATATGCACTTCCACCAGCCATGAATATAGGTACCATAGCACAATTATTTGGAGCTGGTGAAAGTGAATGTTCTGTAATGATGCTATGGACCTATGCATTGGCGTCAATTGCAGTGACTCTTTGGTCAACCTACTTCATGTGGCTTGTCTCTTGA 1254 0.3812 MGFLELFSVASFPVIKVLLVTGIGLLLALDNINLLGKDARNQTNHLVHYVFNPGLIGGNLAQTITLDNVVSLWFMPVNILVTFLLGSALGWIIIKLTKPPRHIEGLIVGVCSAGNLGNLPIIIIPAICKDKGSPFGDPDVCYQFGMAYASLSMAIGAVFIWTYVYNIMRISSRNVHKECNKSSDSITLEDSRDVSQSIIEEGSENYTSPTKGNVDDAYTLLLSKNESEQKIKVPVFDKIKHKFGMILGNPNFRGIFSPATLGAIVGFIVGVVPWLRRLMIGSNAPLHVIEDSASMLGDAAIPTITLIMGANLLRGLKGASTPFWTIIGIIVVRYILLPIFGVLIIKGATHLGLVQIDPLYQFVLLLQYALPPAMNIGTIAQLFGAGESECSVMMLWTYALASIAVTLWSTYFMWLVS* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1009 417 Pfam Membrane transport protein 12 408 IPR004776 GO:0016021|GO:0055085
Mtr5g1009 417 PANTHER AUXIN EFFLUX CARRIER FAMILY PROTEIN 1 417 - -
Mtr5g1009 417 PANTHER - 1 417 IPR045033 GO:0080162
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1009 Mtr-Chr5 10114279 10118031 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1009 K24139 - gmx:100785182 615.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1009 5 10114279 10118031 Mtr5g1009 5 10114279 10118031 ECH
Mtr5g1009 5 10114279 10118031 Mtr8g2284 8 33130542 33134522 PCT