Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1007 ATGAAATTCAGATTTTGTCCAAACAACAACTGGATCACTCTTTTCAACAAAGCGCGAAATCTAATCTCCACTCAACGCGCCTCCGTCTCTTCCGCCGCATCCGCCGCATCCGCCACCGCCATGACTGACACCACCACCCTCCCCACCGTTAAAACCAAGCTCTGCATCATCGGCAGCGGCCCCGCCGCCCACACCGCCGCTGTCTACGCCGCCCGTGCCGAACTCAAACCAATCCTCTTCGAAGGATGGATGGCCAACGACATCGCTCCGGGAGGCCAACTCACCACTACAACCGACGTCGAGAATTTCCCCGGCTTCCCCGACGGCATCCTCGGCGGCGAACTCATGGAACGTTGCCGTCAACAGTCCGCGAAATTCGGAACCGAGATCTTCACCGAAACAGTTTCTAAGGTTGATTTCTCTACTCGTCCTTTTAGGGTTTTCACTGATTCACGAACCGTTGAAGCTGATTCGGTTATCGTCGCTACCGGAGCTGTTGCGAAACGGTTACCGTTCACCGGCTCCGGTGACGGTCCTAATGGTTACTGGAACCGTGGGATCTCAGCTTGTGCTGTATGTGACGGTGCGGCTCCGATCTTTCGTAACAAACCTTTGGCAGTGATCGGTGGTGGAGATTCAGCTATGGAGGAAGCAACGTTTTTGACAAAATACGGTTCTGAAGTTTACATCATTCACCGTAGGGATACGTTTCGGGCTTCGAAGATTATGCAGAGTAAGGCTTTGAGTAATGAAAAGATTAAGGTGATTTGGAATTCAATGGTGGTTGAGGCTTTTGGAGATGGGGAGAATAAGAAGCTTGGGGGTTTGAAGGTGGAGAATGTGGTGACAAAAGAGGTTACTGATTTAAAGGTTTCCGGATTGTTCTTTGCAATTGGGCATGAACCGGCTACAAAGTTTTTGGATGGTCAATTAGAGCTTGATTCTGATGGGTATGTTGTGACGAAGCCGGGTACTACGAAGACTAGTGTTGAGGGTGTTTTTGCTGCTGGGGATGTTCAGGATAAGAAGTATAGACAAGCTATTACTGCTGCTGGATCTGGGTGCATGGCAGCTTTGGATGCAGAACATTTCCTGCAAGGAGTTGGTTTACAGCAGGATAAGAGTGATTGA 1131 0.5004 MKFRFCPNNNWITLFNKARNLISTQRASVSSAASAASATAMTDTTTLPTVKTKLCIIGSGPAAHTAAVYAARAELKPILFEGWMANDIAPGGQLTTTTDVENFPGFPDGILGGELMERCRQQSAKFGTEIFTETVSKVDFSTRPFRVFTDSRTVEADSVIVATGAVAKRLPFTGSGDGPNGYWNRGISACAVCDGAAPIFRNKPLAVIGGGDSAMEEATFLTKYGSEVYIIHRRDTFRASKIMQSKALSNEKIKVIWNSMVVEAFGDGENKKLGGLKVENVVTKEVTDLKVSGLFFAIGHEPATKFLDGQLELDSDGYVVTKPGTTKTSVEGVFAAGDVQDKKYRQAITAAGSGCMAALDAEHFLQGVGLQQDKSD* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1007 376 PRINTS FAD-dependent pyridine nucleotide reductase signature 54 73 - -
Mtr5g1007 376 PRINTS FAD-dependent pyridine nucleotide reductase signature 156 174 - -
Mtr5g1007 376 PRINTS FAD-dependent pyridine nucleotide reductase signature 204 222 - -
Mtr5g1007 376 PRINTS FAD-dependent pyridine nucleotide reductase signature 291 307 - -
Mtr5g1007 376 PRINTS FAD-dependent pyridine nucleotide reductase signature 318 340 - -
Mtr5g1007 376 PANTHER THIOREDOXIN REDUCTASE 49 372 - -
Mtr5g1007 376 Pfam Pyridine nucleotide-disulphide oxidoreductase 53 353 IPR023753 GO:0016491
Mtr5g1007 376 Gene3D - 56 364 IPR036188 -
Mtr5g1007 376 PRINTS Pyridine nucleotide disulphide reductase class-II signature 53 75 - -
Mtr5g1007 376 PRINTS Pyridine nucleotide disulphide reductase class-II signature 91 106 - -
Mtr5g1007 376 PRINTS Pyridine nucleotide disulphide reductase class-II signature 112 122 - -
Mtr5g1007 376 PRINTS Pyridine nucleotide disulphide reductase class-II signature 157 165 - -
Mtr5g1007 376 PRINTS Pyridine nucleotide disulphide reductase class-II signature 183 195 - -
Mtr5g1007 376 PRINTS Pyridine nucleotide disulphide reductase class-II signature 200 224 - -
Mtr5g1007 376 PRINTS Pyridine nucleotide disulphide reductase class-II signature 252 268 - -
Mtr5g1007 376 PRINTS Pyridine nucleotide disulphide reductase class-II signature 293 314 - -
Mtr5g1007 376 PRINTS Pyridine nucleotide disulphide reductase class-II signature 328 346 - -
Mtr5g1007 376 SUPERFAMILY FAD/NAD(P)-binding domain 46 365 IPR036188 -
Mtr5g1007 376 TIGRFAM TRX_reduct: thioredoxin-disulfide reductase 53 365 IPR005982 GO:0004791|GO:0005737|GO:0019430
Mtr5g1007 376 ProSitePatterns Pyridine nucleotide-disulphide oxidoreductases class-II active site. 190 212 IPR008255 GO:0016491
Mtr5g1007 376 PANTHER THIOREDOXIN REDUCTASE 1-RELATED-RELATED 49 372 - -
Mtr5g1007 376 Gene3D - 172 303 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1007 Mtr-Chr5 10084126 10088787 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1007 K00384 - gmx:100790557 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1007 5 10084126 10088787 Mtr5g1007 5 10084126 10088787 ECH