Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0982 ATGGCGACGGTAAGACCTTTACCGGAATCTGTTCGTAGCTCAATTCGTTCTGCATTTTCGTTGTTCGACTTCACAAGAATCGTTGAGGAACTTGTTTACAATAGCCTCGATGCTCGCGCTACAAAGGTTTCAGTGTTTGTTGATATTGGAAGCTGCTACTTGAAAGTAGTTGATGACGGAGGTGGGATTACTCGAGATGGACTGGAATTGGTGGGAGAAAGATATGCTACATCGAAATTTCTTAATTTGGCGGACCTGAATGCTACCAGTGAAAACTTCGGTTTTCGTGGTGAAGCTTTAGCTTCCATTTCTGAAGTCTCTTTGTTGGAAATAGTGACAAGAGCTTATGGACGGCCAAATGGATATAGGAAAGTATTGAAGGGTTGCAAGTGTATATATCTTGGTATTGATGATGATAGAAAGGAAGTAGGCACAACAGTCATTGTCTCTGAAATATTCTACAACCAACCAGTTCGGAGGAAACAAATCCAATCCAGCCCCAATAAGGTACTTCAATCAATCAAGAAATGTGTGATGCGGCTTGCACTCGTGTGCCCAAATATCTCCTTCAAAGTTGTTGATATTGAAAGAGAATATGAACTTTTCTGCTCACATTCTGCTGCTTCTCCACTGTCACTTGTAACCACTGGCTTTGGGGTGGAGGTCACAAACTCTCTCCATGAATTAGAAGTTGAAAACGATATCATAAAGCTTACTGGATACATATCAGGTCCTTGCAATACCCTGGATATGAAGGCCTTACAGTATCTCTATATCAACTCCCAGTTCGTTTGCAAGGGACCTGTTCATAAGCTTTTAAGTCAATTAGCTATTAGATTTGAGCATCGTAACTCGTGGAGTGCTGATAATGAAAGCCAAAACAAAAAGAGAGGCAGATTTCAACCATGCCCGGCATATATCTTGAATTTAAGGTGCCCCCGCTCTTTATATGTTTTGAGCTTTGAGCCGTCAAAAACTTATGTTGAATTCAAGGATTGGGCTCCAATACTAAACTTCATTGAAAAGGTCATCAAACAGTTCTGGGAGGGAAGCATAGCTTGTGATTCCTCCAACAAAGCCTCTTATATGGTTCAAGAAGATCAACGTGAGAAAGTAGATGCCACCATTTCAGCAGAAGCAGATATATCAAAGTTTGGAAGCCAAAATCGTAAGGATTGTTTAGACCTCTTCTTTTCCACTTCAGACAAGCTAAATGAAGATGACAATCATCAGTGCTACAGGGAGGATGTGATAACCTCTATTGATTACTTATATCGAGGGACCAAGATCTTGAAAGAGAAACAAAAAAAGGGAGGCCATCTTTGTCAGACCGGTTATTCTGGCAATTTACTGGATGTTTCTTATGCCAAAAGCATGTCCACCATTATGAAAAAGAGTAACAGTTTTTTGACGTATGATAACAATGATTTATGGCAAGGAGTTCACTTTTTGGATGGTATGTGTCCTGCTGCCGAAAGTTTCTATGATAATATTCCTTCTTATGCAAGAAGTTCTTCACGTGGAAGAAAATTAAATGAAGAAGATGCTGGCATGATCTGTGAATCATTTGAAGGTTATGAATGCCATGGGTTCGGTTATGATGAAGAGATTGGTTGGAATTTTCAAAAGCCTTTTCTAAAGAGCTGCTCTACACAAAAAGATAGTATCCTGAACGAGAAGACTTTGCTTGTAAATGATGAACTTCAACTCCAAACCGATAGCTTTTGGAGTAAGCAAAACCTAGGGGAGGATTTTTGCAGTGGTAGTAAGGATTTATACACCCGTCCCTGTGTAGAAGTTGCAAAAAAATTAAAGATGTCTGAAGATTCTGATTTTCTTGTAAAAGCATGGCCTGAAGAAAATTGTCTCCCTCTAGATTCATGGTATTCAGCAACACAAATAGGTAACTCTGGTTCTGATGATCGGTTATCAAACTCTGAATGGCATCATGTCTACCAAGAATCCTCATCTCGAGCTACTGCATTGAGTGTTTATCATACCAATGATATTAATGATCTTGCAGGATCATCTAGATGCAATAAAAGGATTCCTCGTACACCAATTTTCGATGACAAAGAAAATGGGAACATTTTCAGCTACGATCTTGGAGGAGCATCCAGATGCAGTACAAGGATTACACATATTTTTGACGATGAAGAAAATGGGTACAACTTCAGTTATGACATGTCAAGGAATGCTAACCAGGATCCCTGCACCTCAAGTTTTGCAAATAGTGGATTTAGTTTTGATGGTGCTGTTGATTGTAAAGAAATATTCAACAGATTGGTTGACTGGCCTGATTTCCATGATACACATTTCACAAAAAGGTCGGATATTTTAATTGAGGAGCCAGACTGCCTATTACCTGAGTCATGTGTTATAAAATGTAACAGACCCAACATTATAAAAGGCGATAGGGATCTTTTTAGGCACCCAACTTTGGAAAAGACTCGTGTAAGATCTAAAAGAAGCTTCTCAGCTCCTCCATTTCACAGAAGTAGAAGGAGGTTTTTCTCTTTAAATCAGCCTCCTCAAATGGTAGCTAAAAGACCTAGCGGTCTAGCATCCGACCCTGCTTCCAGTCTTCTAGAAGCAAGTGATTTTAAATATTCTCAACATTCTCCTGACGCTCTTAGCCCCAACAATGAAGATCTATTGGATAATCTTAAAACTAATGTGAAACGGAGTTCAGAGGTTCTGGGGGCTACACAGGTTAATGACACTGCTGAGACTGAAGGGTTTGAAAGTTTCAATGTTCAACAGAATGATCCATTCAGGGAATTGATATCTAAGGAAGTGCAAGATTCCGTAGATTATGGGACTAAATGGAGGAGCTGCGCACCTCAAACTCCAAAGAATGATAAAATTGACATTCAAAGTCAAAATAATATACTTGATATCTCTTCTGGATTCTTGCATCTTGCTGGAGATTCACTGATCCCTGATACTATCAGCAAGAAATGCCTTGAGGATGCCAAAGTTCTTCATCAGGTGGATAAGAAATTCATTCCAATCATGGCTGGCAGAACCCTTGCTGTTATTGATCAGCATGCTGGAGATGAAAGAATCAGACTGGAAGACTTGCGTCAAAAGGTATTATCTGGAGAAGCAAAAGCAATAACCTATCTAGATGCTGAACAGGAGCTGGTACTGCCAGAGATTGGTTATCAACTACTTCATAGTTACAGGGAACAGATTAAAGATTGGGGCTGGATATGTAACATTCATACTCAAAATTCTGAATCCTTTAGAAGGAATTTGGATCTTCTCAACAGACAACAAATGACAATTGCTCTTGTTGCGGTACCATGTATTTTAGGTGTCAATTTAAATGATGTTGATCTTTTAGAGTTTCTTCAGCAGCTAGCTGATACTGACGGATCATCAACAATGCCACCCTCCGTTGTACGACTCCTAAATTCGAAATCGTGCAGAGGTGCAATTATGTTTGGGGATTCATTGCTACCATCAGAATGCTCCCTTCTAGTTGAAGAGCTAAAGCATACATCCCTCTGTTTCCAGTGTGCTCATGGGAGACCAACCACTGTTCCTCTAGTCAACTTGGAGGCACTGCGTAATCAAATAGACAAGCTTGGACTGATGAATAAGAGCTCAAGTAACAAGTGGCATGGATTACAAAGACATGAAGTGTCTATTGATCGTGCAGTACAGCGTTTAAGTTCTGCCAATAGTTGA 3696 0.3985 MATVRPLPESVRSSIRSAFSLFDFTRIVEELVYNSLDARATKVSVFVDIGSCYLKVVDDGGGITRDGLELVGERYATSKFLNLADLNATSENFGFRGEALASISEVSLLEIVTRAYGRPNGYRKVLKGCKCIYLGIDDDRKEVGTTVIVSEIFYNQPVRRKQIQSSPNKVLQSIKKCVMRLALVCPNISFKVVDIEREYELFCSHSAASPLSLVTTGFGVEVTNSLHELEVENDIIKLTGYISGPCNTLDMKALQYLYINSQFVCKGPVHKLLSQLAIRFEHRNSWSADNESQNKKRGRFQPCPAYILNLRCPRSLYVLSFEPSKTYVEFKDWAPILNFIEKVIKQFWEGSIACDSSNKASYMVQEDQREKVDATISAEADISKFGSQNRKDCLDLFFSTSDKLNEDDNHQCYREDVITSIDYLYRGTKILKEKQKKGGHLCQTGYSGNLLDVSYAKSMSTIMKKSNSFLTYDNNDLWQGVHFLDGMCPAAESFYDNIPSYARSSSRGRKLNEEDAGMICESFEGYECHGFGYDEEIGWNFQKPFLKSCSTQKDSILNEKTLLVNDELQLQTDSFWSKQNLGEDFCSGSKDLYTRPCVEVAKKLKMSEDSDFLVKAWPEENCLPLDSWYSATQIGNSGSDDRLSNSEWHHVYQESSSRATALSVYHTNDINDLAGSSRCNKRIPRTPIFDDKENGNIFSYDLGGASRCSTRITHIFDDEENGYNFSYDMSRNANQDPCTSSFANSGFSFDGAVDCKEIFNRLVDWPDFHDTHFTKRSDILIEEPDCLLPESCVIKCNRPNIIKGDRDLFRHPTLEKTRVRSKRSFSAPPFHRSRRRFFSLNQPPQMVAKRPSGLASDPASSLLEASDFKYSQHSPDALSPNNEDLLDNLKTNVKRSSEVLGATQVNDTAETEGFESFNVQQNDPFRELISKEVQDSVDYGTKWRSCAPQTPKNDKIDIQSQNNILDISSGFLHLAGDSLIPDTISKKCLEDAKVLHQVDKKFIPIMAGRTLAVIDQHAGDERIRLEDLRQKVLSGEAKAITYLDAEQELVLPEIGYQLLHSYREQIKDWGWICNIHTQNSESFRRNLDLLNRQQMTIALVAVPCILGVNLNDVDLLEFLQQLADTDGSSTMPPSVVRLLNSKSCRGAIMFGDSLLPSECSLLVEELKHTSLCFQCAHGRPTTVPLVNLEALRNQIDKLGLMNKSSSNKWHGLQRHEVSIDRAVQRLSSANS* 1232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0982 1231 Pfam DNA mismatch repair protein, C-terminal domain 218 347 IPR013507 GO:0005524|GO:0006298|GO:0030983
Mtr5g0982 1231 PANTHER DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL 1 1190 IPR038973 GO:0006298|GO:0016887|GO:0032300|GO:0140664
Mtr5g0982 1231 Gene3D - 997 1185 IPR042120 -
Mtr5g0982 1231 Gene3D - 214 352 IPR014721 -
Mtr5g0982 1231 Gene3D - 1038 1149 IPR042121 -
Mtr5g0982 1231 PANTHER DNA MISMATCH REPAIR PROTEIN MLH3-RELATED 1 1190 IPR028830 GO:0006298
Mtr5g0982 1231 SMART MutL_C_2 994 1154 IPR014790 GO:0005524|GO:0006298
Mtr5g0982 1231 ProSitePatterns DNA mismatch repair proteins mutL / hexB / PMS1 signature. 94 100 IPR014762 -
Mtr5g0982 1231 SUPERFAMILY DNA mismatch repair protein MutL 992 1185 IPR037198 -
Mtr5g0982 1231 Gene3D - 3 208 IPR036890 -
Mtr5g0982 1231 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 118 - -
Mtr5g0982 1231 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 23 203 IPR036890 -
Mtr5g0982 1231 Pfam MutL C terminal dimerisation domain 993 1154 IPR014790 GO:0005524|GO:0006298
Mtr5g0982 1231 SMART DNA_mis_repair_2 214 349 IPR013507 GO:0005524|GO:0006298|GO:0030983
Mtr5g0982 1231 SUPERFAMILY Ribosomal protein S5 domain 2-like 219 348 IPR020568 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0982 K08739 - gmx:100788019 1650.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0982 5 9771960 9781887 Mtr5g0982 5 9771960 9781887 ECH