Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0976 ATGACCGAAACCTTAGAATACTCCCCCTACCCTCCAATAGACCCAATCAACTTCGATCTTATTATCGTCGGCACCGGCCTTTCCGAATCCATCATCTCCGCCGCCGCATCCGCCGTCGGAAAAACCATCCTCCACCTCGATCCCAATCCCTTCTACGGTAGCCATTTCGCTTCTCTCTCCTTCGAAGATCTCATTTCTCACCTCAATTCTCCTCCCAAATACATTACCGCCACCGCCACCGCCACCACCGACAATTCCGACTACACCACCGTAAATCTCATCCAGCAAACTATATTCTCCGATGCGGAGTTCAATTCATGCAATTCCATCGAAGAATCCCAATTCCTTCGCGAAAATTCGAGAAAATTCAACCTCGATTTAGCAGGACCTAGGGCATTGTTTAGCGCGGACAAAACAATCGATTTGTTGTTGAAATCAGGTGCTGCACAGTACTTAGAATTCAAAGGAATCGATGCGAGTCTTGTTTACAATACGAATGAGGGTTTAGTGAATGTTCCAGATTCACGTGGAGCGATTTTTAGAGATAAGAATCTTTCGCTTAAGGAGAAGAATCAGTTGATGAAGTTTTTTAAGCTTGTTCAGCAACATTTGGGTGGTAATGAGGATGAGAAGATTTCGGAGGAAGATATGGAGAGTTCGTTTGTTAGTTACTTGGAGAAGCTTGGTTTGCCGTCAAAGATAAAAGCGATTCTTTTGTATGCTATAGCCATGGTAGATTTTGATCAAGAAAATGGTGGGGTTTGTAAAGATTTACTGAAAACAAAAGATGGAATAGATCGTTTAGCTCAATACAGCTCATCGGTTGGAAGGTATCCCAATGCCCCGGGGGCTTTGCTTTATCCTATTTATGGTGAAGGGGAACTACCACAAGCTTTTTGTCGTCGTGCTGCTGTCAAAGGTTGCATTTATGTTCTCAGAATGCCGGTTATTTCCCTGCTTATAGATAAGGTTACTGGGTCGTATAAGGGTGTTAGATTATCTTCAGGTCAAGATTTATATAGTCATAAGTTAATCCTGGACCCATCCTTCACAATTCCATCAACTCCGTCTTTGTCTCCTAAAGATTTTTCGCTCCAGATGTTGAGTCATGTAGACATTAAAGGAATGGTTGCTAGGGGAATATGCATCACAAGGAGTTCCATAAAGCCAGATGTATCAAATTGCTCTGTGGTTTATCCTCCTAGATCTCTGTATCCTGATCAGGTTACATCAGTCAGAGCTCTTCAGATAGGATCGAATCTTGCTGTTTGTCCTGCGGACACCTTTGTTTTATACTTTTCCACTTTGTGCAATGATGCCAATGAAGGAATGAAGTTACTAAAAGCATCCATGAATGCTCTTCTTACACCACCTGTATCTGGAAACACAGAAAGTTCTCCCAATGTTCAAAGTGGAAGTGAAGATAAAAAACCTGTTGTGCTCTGGAGTGCCTTTTATATTCAAAAATTAACTTCGAGTAAATTTGAAGCTATCAGTTCCACTCCGACACCGGATGGAAATCTAAACTACGTTGACCTTTTAGATGAAACTGAGAAGCTATTTGGTCAAATGTACCCCAATGAAGAATTCTTTCCAAAGACGACATCCCCTGAAGATACCATGGATGATGATGATAATGGGATTATTATGGAGAACTAA 1659 0.4183 MTETLEYSPYPPIDPINFDLIIVGTGLSESIISAAASAVGKTILHLDPNPFYGSHFASLSFEDLISHLNSPPKYITATATATTDNSDYTTVNLIQQTIFSDAEFNSCNSIEESQFLRENSRKFNLDLAGPRALFSADKTIDLLLKSGAAQYLEFKGIDASLVYNTNEGLVNVPDSRGAIFRDKNLSLKEKNQLMKFFKLVQQHLGGNEDEKISEEDMESSFVSYLEKLGLPSKIKAILLYAIAMVDFDQENGGVCKDLLKTKDGIDRLAQYSSSVGRYPNAPGALLYPIYGEGELPQAFCRRAAVKGCIYVLRMPVISLLIDKVTGSYKGVRLSSGQDLYSHKLILDPSFTIPSTPSLSPKDFSLQMLSHVDIKGMVARGICITRSSIKPDVSNCSVVYPPRSLYPDQVTSVRALQIGSNLAVCPADTFVLYFSTLCNDANEGMKLLKASMNALLTPPVSGNTESSPNVQSGSEDKKPVVLWSAFYIQKLTSSKFEAISSTPTPDGNLNYVDLLDETEKLFGQMYPNEEFFPKTTSPEDTMDDDDNGIIMEN* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0976 552 Gene3D Guanine Nucleotide Dissociation Inhibitor, domain 2 96 490 - -
Mtr5g0976 552 Gene3D - 15 530 IPR036188 -
Mtr5g0976 552 Pfam GDP dissociation inhibitor 17 70 IPR018203 GO:0005092|GO:0007264
Mtr5g0976 552 Pfam GDP dissociation inhibitor 118 446 IPR018203 GO:0005092|GO:0007264
Mtr5g0976 552 Gene3D Guanine Nucleotide Dissociation Inhibitor, domain 1 172 284 - -
Mtr5g0976 552 SUPERFAMILY FAD-linked reductases, C-terminal domain 374 491 - -
Mtr5g0976 552 PANTHER RAB PROTEINS GERANYLGERANYLTRANSFERASE COMPONENT A 14 539 - -
Mtr5g0976 552 PRINTS Rab GDI/REP protein family signature 19 37 IPR018203 GO:0005092|GO:0007264
Mtr5g0976 552 PRINTS Rab GDI/REP protein family signature 37 54 IPR018203 GO:0005092|GO:0007264
Mtr5g0976 552 PRINTS Rab GDI/REP protein family signature 139 155 IPR018203 GO:0005092|GO:0007264
Mtr5g0976 552 PRINTS Rab GDI/REP protein family signature 189 204 IPR018203 GO:0005092|GO:0007264
Mtr5g0976 552 PRINTS Rab GDI/REP protein family signature 291 312 IPR018203 GO:0005092|GO:0007264
Mtr5g0976 552 PANTHER RAB GDP-DISSOCIATION INHIBITOR 14 539 IPR018203 GO:0005092|GO:0007264
Mtr5g0976 552 MobiDBLite consensus disorder prediction 528 552 - -
Mtr5g0976 552 PIRSF Rab_ger_ger_transf_A_euk 1 97 IPR001738 GO:0005968|GO:0006886|GO:0018344
Mtr5g0976 552 PIRSF Rab_ger_ger_transf_A_euk 72 552 IPR001738 GO:0005968|GO:0006886|GO:0018344
Mtr5g0976 552 SUPERFAMILY FAD/NAD(P)-binding domain 15 350 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0976 Mtr-Chr5 9700041 9706406 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0976 K23460 - gmx:100795946 822.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0976 5 9700041 9706406 Mtr5g0976 5 9700041 9706406 ECH