Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0898 ATGGCTTCCACACCCACCCAATTCTCCATCTCCATCTCCCCCTCCCTCAAACAACAACCAATTCACCTCTCCTCCCTTCAAAATCCTAACTTTCTACACCCCCACTCTTTCTCCCCTCACTCCACCAACCTTTTTCCTAAAAAAATCTCTCTTTCTACACCTCTTAGGTCACCAATATGCGCTAGTTCCTCTCAACTCATGGACCCCTTTTCAGCAAAAATCCAACCTGGTGTTCCCACCATTGTTAACGTTGATTTGGGTAATCGGAGCTACCCCATTTACATCGGATCCGGGTTGCTCAATAAACCTGAACTTCTTCAAAGGCATGTCCATGGAAAGAAGGTCCTTATTGTCACTAACACTACAGTTGCACCTTTGTATCTAGACAAGGTTGTTGATGCTTTAACAAGTGGAAACCCAAATGTTTCTGTTGAGAGTGTAATTTTACCGGACGGTGAGCAGTACAAGGACATGGATACTCTTATGAAAGTGTTTGACAAGGCCATTGAGTCTCGATTGGACCGGCGGTGTACTTTTGTTGCCCTTGGAGGTGGTGTGATTGGCGACATGTGTGGCTTTGCTGCCGCTTCATTCCTACGTGGTGTTAATTTTATTCAGATTCCAACCACTGTTATGGCACAGGTTGATTCTTCAGTTGGTGGCAAAACTGGTATAAACCATCCCCTTGGGAAGAACTTGATTGGTGCTTTTTACCAACCTCAATGTGTGCTTATAGACACAGACACATTAGACACATTACCAGAGAGGGAACTGGCATCAGGTTTTGCAGAGGTTATAAAGTATGGGCTCATTAGGGATACAGAATTTTTTGAGTGGCAAGAGAAAAATATGCAGGCATTAATGGCCAGAGATCCTAATGCATTGGCATATGCTATAAAGCGATCGTGTGAAAACAAGGCTGAGGTTGTGTCCTTGGATGAGAGAGAAGGTGGAGTGAGGGCAACATTGAACTTGGGTCATACATTTGGCCATGCAATAGAAACTAGCGTTGGCTATGGGCAGTGGCTTCATGGAGAGGCTGTTGCAGCTGGCACGGTAATGGCTGTTGACATGTCATATCGCCTTGGTTGGATTGATGATTCTATTGTGAAGCGAGTTAGTGACATTTTGAAACAGACTAAGTTACCTATTGTGCCTCCTGAAATGATGACTGTGGACATGTTTAAGTCTGTCATGGCGGTTGATAAGAAGGTAGCAGACGGATTGCTGAGACTTATCCTACTAAAGGGTCCTCTAGGAAATTGCGTTTTCACAGGGGATTATGACAGAAAGGCTCTAGATGATACACTACAGGCATTCTGTAAATCTTGA 1332 0.4429 MASTPTQFSISISPSLKQQPIHLSSLQNPNFLHPHSFSPHSTNLFPKKISLSTPLRSPICASSSQLMDPFSAKIQPGVPTIVNVDLGNRSYPIYIGSGLLNKPELLQRHVHGKKVLIVTNTTVAPLYLDKVVDALTSGNPNVSVESVILPDGEQYKDMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGFAAASFLRGVNFIQIPTTVMAQVDSSVGGKTGINHPLGKNLIGAFYQPQCVLIDTDTLDTLPERELASGFAEVIKYGLIRDTEFFEWQEKNMQALMARDPNALAYAIKRSCENKAEVVSLDEREGGVRATLNLGHTFGHAIETSVGYGQWLHGEAVAAGTVMAVDMSYRLGWIDDSIVKRVSDILKQTKLPIVPPEMMTVDMFKSVMAVDKKVADGLLRLILLKGPLGNCVFTGDYDRKALDDTLQAFCKS* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0898 443 PANTHER 3-DEHYDROQUINATE SYNTHASE, CHLOROPLASTIC 78 439 - -
Mtr5g0898 443 Pfam 3-dehydroquinate synthase 147 405 IPR030960 -
Mtr5g0898 443 Hamap 3-dehydroquinate synthase [aroB]. 79 441 IPR016037 GO:0003856|GO:0005737|GO:0009073
Mtr5g0898 443 PANTHER 3-DEHYDROQUINATE SYNTHASE 78 439 - -
Mtr5g0898 443 CDD DHQS 90 437 - -
Mtr5g0898 443 TIGRFAM aroB: 3-dehydroquinate synthase 91 432 IPR016037 GO:0003856|GO:0005737|GO:0009073
Mtr5g0898 443 SUPERFAMILY Dehydroquinate synthase-like 82 437 - -
Mtr5g0898 443 Gene3D - 68 252 - -
Mtr5g0898 443 Gene3D - 253 443 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0898 K01735 - gmx:100806628 706.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0898 5 8923366 8927779 Mtr5g0898 5 8923366 8927779 ECH