Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0895 ATGGGTTGTTGCTATTCAAGAGTAGACAGAGAAGAAACAGTGTCACATTGCAAATCAAGAAAACGTTACATGAAACAGTTGGTTGAAGCAAGACATGCTTTTTCAGCTTCACATGTTATGTACATCCGTTCTCTTCGTTCAACTGGTTCAGCTTTGTTTCACTTTGCTAACGCTGAAAAAACCACTCATCTTAACCACCATCTTCCGCCAGAGCCACAACCCATTCTTCCACCACCGCCGCCGCGTGCTCCGTCGCCAATGCCACCACCACCACCTCCGATGAGTCCTAGTTTGAGTTCTTATACTTGGACTTCTGGGACTGGTTCACATTCATCAGCTCTTCCGCCGCCGCCGCCACCTCCACCACCTCCACCGCCGGTAATTTCATCTGGTTGGGATTTTTGGGATCCTTTCATGCAGCAACCTCCACCACCTCCTTCGTCACGGTCGGCGACGGAGGAAGAGTGGGAAGCTGCTACTACCACTGGCTCTGAGGTGGTTGTGATGGCTGGTGGGGCGGCGGCGAGTATGGCTACTCCGGCGAGTGGGGTGGTGGGGTATTCTAAGGTGTCAGGAAGTGAACTTGCAATGGTGGTTTCAAGAAACAGTAAAGATCTGGTTGAAGTTATTAAGGAGCTTGATGATTATTTTCTTAAAGCTGCTGATGCTGGTTCTCATGTTTCATATCTGTTACAAGTTCCAAGTTCTGGTTTTTCTGATCATAGTAAAACAAGTAAAATGTACGGAAATGGATGGAATTTGAGTCCATCAATGTGGGCTTGGGGTTCTTCAAGTCCTAAACTGAATGGATTTGGCAAGCTGTCTCAAGAGGTTTCTGTTGGTAGTTTCAGGGCTAATAATGGTGTTGGAAATGGTGGACATTGCTCTACTTTGGAGAGGCTATATGCATGGGAGAAGAAATTGTACCAAGAGGTCAAGAATGCTAAAACAATAAAGATGGAGCATGAGAAGAAGGTGGAATTGGTAAGGAAGTTAGAGATGAGAAGGGCTGATTATGTGAAGACAGAAAAGGCAAAGAAAGAAGTGGAGAAATTAGAATCACAAATGATGGTTGCTTCTCAAACCATTGATAGTACATCGGCTGAAATCGTTAAATTAAGGGAGATAGAGCTCTACCCTCAACTCATTGAGCTTGTTAAAGGGTTGATGTGCATGTGGAGAAGCATGTATGAGTGTCATCAAGTTCAGAAGCACATAGTTCAGCAACTGGAATACCTCAACACCATACCATCAAATAACCCTACATCTGAAATTCATAGGCAATCAACACTTCAGCTGGAGCTTGAAGTACAGCAATGGCACCAATCCTTCTGCAACCTCTTCAAGGCCCACAGGGACTATATTGAATCTCTCAGTGGTTGGCTAAGGCTCAGCCTTTACCAATTTAGCCGAAACCCTCTTAGTAGAACAACTGAGGAGTCGAAGATATTCACCCTCTGCGAACAATGGCACCTTGCCGTTGAGCATATACCAGACAAAGTAGCGTCTGAAGGAATAAAAAGCTTGTTGACGGTTATTCATGCGATTGTAGTTCAACAGACGGAGGAGCATAAACAAAAGAAGAAGTCGGAGTATGCGTTCAAGGAGTTCGAGAAGAAGGTGGTTCAGCTTAGATCTTTGGAGTGCAAGTATGGTCCGTACTCCATGTCGGAACGGTCTGGTTCTGTGAGAAGAACGAAGGACCCTGTCGTGGAGAAGCGAGCTAAGGTGGAAGCTTTCAGAGCAAAGGCTGAAGAAGAGAAGATCAAGCATGAAAAGGCGGTGAGTGTTACGAGGTCAATGACACTGAATAACTTGCAAATGGGCTGTCCTCAAGTTTTTCAAGGGATTGTAGGGTTTTCAAGTGTGTGCATGGAGGCTTTTGAATCTGTATACAACAAAGCCAAAGTTGCCGAACAGGAGCGTGATGTGAAGAGAATATTACCTTAG 1950 0.4523 MGCCYSRVDREETVSHCKSRKRYMKQLVEARHAFSASHVMYIRSLRSTGSALFHFANAEKTTHLNHHLPPEPQPILPPPPPRAPSPMPPPPPPMSPSLSSYTWTSGTGSHSSALPPPPPPPPPPPPVISSGWDFWDPFMQQPPPPPSSRSATEEEWEAATTTGSEVVVMAGGAAASMATPASGVVGYSKVSGSELAMVVSRNSKDLVEVIKELDDYFLKAADAGSHVSYLLQVPSSGFSDHSKTSKMYGNGWNLSPSMWAWGSSSPKLNGFGKLSQEVSVGSFRANNGVGNGGHCSTLERLYAWEKKLYQEVKNAKTIKMEHEKKVELVRKLEMRRADYVKTEKAKKEVEKLESQMMVASQTIDSTSAEIVKLREIELYPQLIELVKGLMCMWRSMYECHQVQKHIVQQLEYLNTIPSNNPTSEIHRQSTLQLELEVQQWHQSFCNLFKAHRDYIESLSGWLRLSLYQFSRNPLSRTTEESKIFTLCEQWHLAVEHIPDKVASEGIKSLLTVIHAIVVQQTEEHKQKKKSEYAFKEFEKKVVQLRSLECKYGPYSMSERSGSVRRTKDPVVEKRAKVEAFRAKAEEEKIKHEKAVSVTRSMTLNNLQMGCPQVFQGIVGFSSVCMEAFESVYNKAKVAEQERDVKRILP* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0895 649 Pfam Protein of unknown function (DUF632) 206 514 IPR006867 -
Mtr5g0895 649 Coils Coil 342 369 - -
Mtr5g0895 649 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Mtr5g0895 649 MobiDBLite consensus disorder prediction 70 97 - -
Mtr5g0895 649 SUPERFAMILY Formin homology 2 domain (FH2 domain) 116 126 - -
Mtr5g0895 649 MobiDBLite consensus disorder prediction 64 157 - -
Mtr5g0895 649 PANTHER SERINE HYDROXYMETHYLTRANSFERASE, PUTATIVE (DUF632)-RELATED 1 634 - -
Mtr5g0895 649 PANTHER UNCHARACTERIZED 1 634 - -
Mtr5g0895 649 MobiDBLite consensus disorder prediction 112 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0895 Mtr-Chr5 8908496 8913637 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0895 204 548 Acyl Lipid Metabolism Gene Families AT2G27090 29.843 4.73e-37 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0895 - - aprc:113869576 928.317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0895 5 8908496 8913637 Mtr5g0895 5 8908496 8913637 ECH