Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0892 ATGGCTACTCAAAACCCTAATCAACGAAATTCACTCTACCCTCAAGTAATCTCTTCCATCCCAACCGCTCCTCCTTCTTCCCAATCAAATCTCTACCCTTCAATCGATCACGATTTCGACGACCTCGTTGAAAATCTCTTCCCTGACACCACCACCACCGCCGGCGTCAACACCACTTCGCCTTCTGCACCGCCGGAAACTACCGAACAGATTCTTATCAAAATCCCCGGAGCCATTCTCAACCTCATCGATCAACAATACAGCGTTGAACTTGCTTCCGGTGACTTCACCGTCGTCCGTCTCCGCCAAGGTGAAAATTCCATCGCCGTCTATGCTCGGATCGCCGATGAAATCCAATGGCCTCTTGCTAAAGACGAAACCGCTGTTAAAGTCGATGATTCTCACTACTTCTTCTCCTTCTCCGCTCCCAAGGGTTATGATTCCGACGAAGATGAAGCGGATCGGAGTAAAAACAGCAAAACCGAATCAGATTTGTTGAGTTATGGATTGACTATTGCGTCGAAAGGACAAGAACATTTATTGAAGGAGTTGGATGTGATTTTGGAGAACTGTAGTAATTTTTCTGTGCAGAAGGTTTCGGAGAAGGCGAAGAAGGGAGAGGTTTTGGATGGAAATTTGGCGAAGGAGGTATCGCCGAAGGATTTGGAGTCATCGAAGAAGAAGAAGGAGATGATGGAGGGGCAATGTGCGGCGTATTGGACTACATTGGCACCGAATGTGGAGGAGTATAGTGGGACTGCTGCGAGGATGATAGCTTCGGGGTCTGGACATGTGATCAAGGGGATTTTGTGGTGTGGTGATGTTACTATGGATAGGTTGCAATGGGGGAATCAGGTTATGAAGAAAAGGATGGCAGCTGGTGAACGTGATGCTCAGATTAGTCCTGAAACTTTGAAGCGGATCAGAAGGGTCAAGAGAGTGACTAAAATGACACAGAAAGTTGCAAATGGATTGCTCTCTGGGGTTGTGAAAGTGTCCGGATTTTTTACCAGTTCAGTGGTAAACTCGAAGGCTGGAAAGAAATTTTTCAGCCTTTTACCGGGGGAAATTGTGCTTGCATCGTTGGATGGATTCAGTAAAGTGTTTGATGCAGTTGAAATAGCTGGAAAAAATGTCATGTCAACGTCATCCACCGTGACAACTGAACTTGTCGACCACAGATACGGAGAAGAAGCTGCTCACGCAACAAATGAAGGGCTTAATGCTGCTGGTCATGCTTTGGGCACTGCATGGGCTGCATTTAAGATTAGGAAGGCTATTAACCCTAAGAGTGTTTTTAAACCTACCACCCTGGCCAAGTCTGCTGCTAAAGCTGCAGCTTCTGATTTGAAGTCTAGCAAGTCCAAGTCCAAGTCCAAGTAA 1383 0.4649 MATQNPNQRNSLYPQVISSIPTAPPSSQSNLYPSIDHDFDDLVENLFPDTTTTAGVNTTSPSAPPETTEQILIKIPGAILNLIDQQYSVELASGDFTVVRLRQGENSIAVYARIADEIQWPLAKDETAVKVDDSHYFFSFSAPKGYDSDEDEADRSKNSKTESDLLSYGLTIASKGQEHLLKELDVILENCSNFSVQKVSEKAKKGEVLDGNLAKEVSPKDLESSKKKKEMMEGQCAAYWTTLAPNVEEYSGTAARMIASGSGHVIKGILWCGDVTMDRLQWGNQVMKKRMAAGERDAQISPETLKRIRRVKRVTKMTQKVANGLLSGVVKVSGFFTSSVVNSKAGKKFFSLLPGEIVLASLDGFSKVFDAVEIAGKNVMSTSSTVTTELVDHRYGEEAAHATNEGLNAAGHALGTAWAAFKIRKAINPKSVFKPTTLAKSAAKAAASDLKSSKSKSKSK* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0892 460 Pfam Senescence domain 257 444 IPR009686 -
Mtr5g0892 460 PANTHER SENESCENCE/DEHYDRATION-ASSOCIATED-LIKE PROTEIN 1 456 - -
Mtr5g0892 460 MobiDBLite consensus disorder prediction 1 34 - -
Mtr5g0892 460 PANTHER SPARTIN 1 456 IPR045036 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0892 Mtr-Chr5 8870739 8875763 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0892 K19366 - gmx:100804971 635.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0892 5 8870739 8875763 Mtr5g0892 5 8870739 8875763 ECH
Mtr5g0892 5 8870739 8875763 Mtr8g2395 8 34335828 34339848 PCT