LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr5g0884	ATGGCTGCTGCAGTAACAGCCGCCGTCTCTTTTCCATACTCCAACTCCACTTCTCTTCCGATCAGGACATCTGTTATTTCCCCAGATAGACTTGTCTTCAAAAAGGTTTCGTTGAATAATGTTTCCATAAGTGGAAGGTTAACTGTCAGAGCCGAAGTTGCTACAGAAGCACCTGCTCCTGTTAAGGTTGAAAAGATATCAAAGAAACAGGAAGAAGGTATTGTTGTGAACAAGTTTAAACCAAAGACACCATACATTGGAAGGTGTCTTCTCAACACAAAGATCACTGGTGATGATGCACCTGGTGAAACCTGGCACATGGTTTTCAGCACTGAGGGAGAGGTTCCTTACAGAGAAGGACAATCAATTGGGATAGTTCCAGATGGTATTGACAAGAATGGAAAGCCTCACAAGCTGAGATTGTATTCAATTGCTAGCAGTGCTCTTGGTGATTTTGGAGACTCCAAAACTGTTTCTCTATGTGTGAAACGTCTTGTGTACACAAATGATGCCGGAGAAGTTGTTAAGGGAGTTTGCTCAAACTTCTTGTGCGACTTGAGGCCTGGATCTGAAGTACAGATTACTGGTCCAGTTGGTAAAGAAATGCTTATGCCAAAAGATCCAAATGCCACCGTCATCATGTTGGGAACTGGTACTGGAATTGCCCCATTCCGTTCATTTTTATGGAAAATGTTCTTCGAGAAGCATGAAGATTACAAGTTCAATGGTTTGGCATGGCTCTTCTTGGGTGTCCCCACAAGCAGCTCACTGCTTTATAAGGAGGAATTTGAAAAGATGAAGGAGAAAGCGCCTGAGAACTTCAGGCTCGACTTTGCTGTGAGCAGAGAACAAGTAAACGACAAAGGAGAGAAAATGTACATTCAAACCAGAATGGCTCAATATGCAGAAGAGTTGTGGGAATTACTGAAGAAAGACAACACTTTTGTTTACATGTGTGGACTGAAAGGAATGGAAAAGGGAATTGATGACATAATGGTTTCACTCGCTGCCAAAGACGGTATTGATTGGATTGAGTACAAGAGATCGCTGAAGAAGGCAGAGCAATGGAATGTTGAAGTCTATTGA	1086	0.4245	MAAAVTAAVSFPYSNSTSLPIRTSVISPDRLVFKKVSLNNVSISGRLTVRAEVATEAPAPVKVEKISKKQEEGIVVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYREGQSIGIVPDGIDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNFLCDLRPGSEVQITGPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWELLKKDNTFVYMCGLKGMEKGIDDIMVSLAAKDGIDWIEYKRSLKKAEQWNVEVY*	362

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr5g0884	361	Gene3D	Translation factors	52	198	-	-
	Mtr5g0884	361	PIRSF	Frd-NADP+_RD	1	361	IPR015701	GO:0016491
	Mtr5g0884	361	PANTHER	FERREDOXIN--NADP REDUCTASE, LEAF ISOZYME 1, CHLOROPLASTIC	1	361	-	-
	Mtr5g0884	361	PANTHER	-	1	361	IPR015701	GO:0016491
	Mtr5g0884	361	SUPERFAMILY	Riboflavin synthase domain-like	66	203	IPR017938	-
	Mtr5g0884	361	CDD	CYPOR_like_FNR	77	361	-	-
	Mtr5g0884	361	PIRSF	FNR-PetH	4	361	IPR035442	GO:0016491
	Mtr5g0884	361	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	117	127	IPR001709	GO:0016491
	Mtr5g0884	361	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	140	147	IPR001709	GO:0016491
	Mtr5g0884	361	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	177	186	IPR001709	GO:0016491
	Mtr5g0884	361	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	213	232	IPR001709	GO:0016491
	Mtr5g0884	361	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	243	252	IPR001709	GO:0016491
	Mtr5g0884	361	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	255	266	IPR001709	GO:0016491
	Mtr5g0884	361	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	291	307	IPR001709	GO:0016491
	Mtr5g0884	361	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	315	323	IPR001709	GO:0016491
	Mtr5g0884	361	Gene3D	-	199	361	IPR039261	-
	Mtr5g0884	361	Pfam	Oxidoreductase NAD-binding domain	214	328	IPR001433	GO:0016491
	Mtr5g0884	361	ProSiteProfiles	Ferredoxin reductase-type FAD binding domain profile.	82	204	IPR017927	GO:0016491
	Mtr5g0884	361	SUPERFAMILY	Ferredoxin reductase-like, C-terminal NADP-linked domain	207	361	IPR039261	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr5g0884	Mtr-Chr5	8809297	8812742	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr5g0884	K02641		-	gmx:100798467	656.751

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mtr5g0884	5	8809297	8812742	Mtr5g0884	5	8809297	8812742	ECH