Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0865 ATGGACCGTCGAGGTTGGCCGTGGAAGAAAAAATCATCAGACAAAATCACAAAGGCTGAGAAACCATTTGTTACACTTGACTCTGTTGGTTCCACCTTGTCTTCTGTGGCACATTTAGGAAACCAGCAGGACAATTGCACAAATAAGAACTATGTTCAAATTTCAATGGAGTCATACACGCGTATGTCTGGATTGGAAGATCAAGTTGTAAACATGGAGAATCAAATAAAAGATTTGGAAGCAAATTTATCAGCAGCTTATTCAGAATTAGACAACAAGGAAAGTCTGGTTAAACAACACGCAAAAGTTGCCGAGGAAGCCGTCTCAGGTTGGGAGAAAGCTGATGCAGAAGTTGTTTCCTTAAGACACCAACTTGAATCTATCACTCTTTCGAAGCTTAGTTGCGACGAGAGAATAGCTCACTTAGATGGAGCTCTGAAAGAATGCATGAAGCAGATAAGAACTGTAAAGGAGGAAAGTGAGCAAAAAATACAAGAGGTGATTCTTATGAAATCTCAACAGTGGGAGAAATTCAAGTTAGAGCTTGAAGCAGAAATACACAAATTAGATAAAGGACTTCGCGAAGAAGCTCATGAAAATGCCTCCCTTCTGAGATCACTTCATGAAAGTTCAAATAAAATTGTGAAACTAAAAGAAGAAAAGTCCGAAGTTGAGTCCGAGTTAGAGCTTCAAAAGAAGAATGTTAAGTCGTATGAGAAAGAAGTAAGTTCTTTGAAGTATGAGCTGCATATGATTTCTAAGGAGATGGATATCCGAAATGAAGAGAAGAACATGATTATGAAATCAGCAGAAGTGGCAAACAAACGACACACCGAGGATGTCAAGACTATTGCCTTGCTGGAGGGCGAGTGCCATCGGCTTCGTGGTCTGTTGAGAAAAAAGTTGCCTGGTCCTGCTGCATTGGCACAAATGAAGCTAGAAGTTGAAAGTACACGCCACGTCATCAGTGGAATCCATCAAAGAAAAACTAATGGCCTGCAAGAATCCGAGGTTCTTACAAAACAATTGGAGGTGTTTGAAGAAGAAACAAAGAGATTGAAAGAAGCTTTGGCCTCAAGTAATGCTGAATTACAGGCTTCTAGGAACTTGTACACCAAAACAGTTAACAGACTTAAGAGCTTAGAAGCGGAGGTACAAGTTCTTCATCAAGAAAGAAGTTCCCAGAAATCAAATTTGGCAAACAATTATAGGAGTTCTTCAAGTAGAATTTCTAGTAATTCACCGAGCATCACTTCTATATCTGATGGCTGGCACAAGGATCCGGGAAGTCCTGTTGAGTCACTTGCATCCTCAGTTTCTGACCATTTTGGTAACAGTAGAGTTAGAAGCTCAGTTAAATTTGAGAATCACGAAAGTGAAACTTTCTCAGAACTGATGGACGATTTCCTTGAAGTCGAGAAAATGGCATGCTCATCAGACAATGCCAGTGTGCAAATTGGTAACAAAGTTAAGAACTACGCCGTAGATAAACAATCAGATGATACGCTTGATCTTAAGGACAAAAATGCGAATTTAGTGGAACATGAACAGCTTCTGGAAGAACTGAAAGCGCAATTGGCGTCATCTCATAAATCATACAACTTGGCCGAGATTCAGCTGAAATGCATGACAGAGTCTTATAAGTCACTTCAAACACATGTAGAAGAGTTAGAAGCTGAAAATAAGTTTCTAAAGGAAAAAATAGATGAGCTAAAGAATGATCTAGAGGAGGAAAAACAATGTCATCACGATTCTTTGGTGAGGCACAAAGATATTGAGGAAAAAATGCAAAGGGACAAGTGTCTGGTGTGTGCAACGAATTCAGCTGAAAATAATGACATCAATACTCAAAAGGACACAGAACTAGCAGCTGCAGAGAAAAAACTAGCAGAATGTCAGGAGACACTACATGTACTTGGTAGGCAATTACAAGCAATGTGCCCACAAACTGACTCTAAAAGATTTCAAACAAATGAATCTTCCATTAAACCGAATTATGGCTGGTCGAATTCTAATGGCTCGTATACCTCAGATGAAATTGATCATGCTGAAGCATGTAGTGTATCTTCTACTTCTGACATTCAAGGAATGAATGATGAGTTTTCATCTTCACACAACTTTGGTTCCACATCATGTCTTTCGGACACCGAAGGCAACTTTTCGACAAATTCTTCAATTAAGTCAAGCCGAAGCTGTTATATGCTTACTGAATCAAATTCACGTCCTTCTGCTTCTGCCACAGGGAAGCAAAATTCACATGGTTTGAGTCAATTATTTTCTTCTAAAGAGAAAACTGGTCACTAG 2304 0.3932 MDRRGWPWKKKSSDKITKAEKPFVTLDSVGSTLSSVAHLGNQQDNCTNKNYVQISMESYTRMSGLEDQVVNMENQIKDLEANLSAAYSELDNKESLVKQHAKVAEEAVSGWEKADAEVVSLRHQLESITLSKLSCDERIAHLDGALKECMKQIRTVKEESEQKIQEVILMKSQQWEKFKLELEAEIHKLDKGLREEAHENASLLRSLHESSNKIVKLKEEKSEVESELELQKKNVKSYEKEVSSLKYELHMISKEMDIRNEEKNMIMKSAEVANKRHTEDVKTIALLEGECHRLRGLLRKKLPGPAALAQMKLEVESTRHVISGIHQRKTNGLQESEVLTKQLEVFEEETKRLKEALASSNAELQASRNLYTKTVNRLKSLEAEVQVLHQERSSQKSNLANNYRSSSSRISSNSPSITSISDGWHKDPGSPVESLASSVSDHFGNSRVRSSVKFENHESETFSELMDDFLEVEKMACSSDNASVQIGNKVKNYAVDKQSDDTLDLKDKNANLVEHEQLLEELKAQLASSHKSYNLAEIQLKCMTESYKSLQTHVEELEAENKFLKEKIDELKNDLEEEKQCHHDSLVRHKDIEEKMQRDKCLVCATNSAENNDINTQKDTELAAAEKKLAECQETLHVLGRQLQAMCPQTDSKRFQTNESSIKPNYGWSNSNGSYTSDEIDHAEACSVSSTSDIQGMNDEFSSSHNFGSTSCLSDTEGNFSTNSSIKSSRSCYMLTESNSRPSASATGKQNSHGLSQLFSSKEKTGH* 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0865 767 Coils Coil 146 166 - -
Mtr5g0865 767 Coils Coil 615 642 - -
Mtr5g0865 767 MobiDBLite consensus disorder prediction 721 767 - -
Mtr5g0865 767 Pfam Filament-like plant protein, long coiled-coil 93 501 IPR008587 -
Mtr5g0865 767 Pfam Filament-like plant protein, long coiled-coil 499 651 IPR008587 -
Mtr5g0865 767 Coils Coil 200 248 - -
Mtr5g0865 767 Coils Coil 62 96 - -
Mtr5g0865 767 MobiDBLite consensus disorder prediction 389 423 - -
Mtr5g0865 767 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 724 - -
Mtr5g0865 767 MobiDBLite consensus disorder prediction 389 440 - -
Mtr5g0865 767 PANTHER FILAMENT-PLANT-LIKE PROTEIN 1 724 - -
Mtr5g0865 767 SUPERFAMILY Tropomyosin 60 262 - -
Mtr5g0865 767 Coils Coil 505 581 - -
Mtr5g0865 767 MobiDBLite consensus disorder prediction 651 670 - -
Mtr5g0865 767 Coils Coil 336 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0865 Mtr-Chr5 8515849 8520253 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0865 - - gmx:100803281 921.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0865 5 8515849 8520253 Mtr5g0865 5 8515849 8520253 ECH