Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0863 ATGGCAGATTCATCACCCAAAACCCCAACACCATCAACAACAAACGGCGACACCACTCCACCACCGCGGAAAGTCGCATTAATCACCGGAATCACAGGCCAAGACGGATCATACCTAACAGAATTCCTCCTCAACAAAGGCTACTCCGTCCACGGCCTAATTCGTCGTTCGTCAAACTTCAACACACAACGAATTGATCACATCTATGTCGATCCACACGACGCTCACAAAGCTCATATGAAGCTTCACTATGCCGATCTCTCCGACGCTTCCGCTCTCCGTCGCTGGCTCGACACTATCCTCCCTGACGAAGTTTACAACCTCGCCGCACAGTCTCATGTCGCGGTTTCGTTTGAGATTCCTGATTACACTGCAGATGTTGTTGCTACTGGTGCTCTCCGTCTTCTTGAAGCCGTCCGATCTCATATCGATGCAACAGGAAGATCTCACATTCGGTACTATCAAGCTGGATCTTCCGAAATGTTTGGATCAACTCCGCCGCCGCAGTCTGAAACGACTCCGTTTCATCCTCGATCTCCTTACGCCGCCTCCAAAGTCGCTGCGCATTGGTACACTGTGAATTACCGTGAAGCATATGGAATTTTTGCTTGTAACGGAATTCTCTTCAATCATGAATCACCACGTAGAGGAGAGAATTTTGTTACAAGGAAGATTACTAGAGTTGTTGGAAGAATCAAGATCGGGCTTCAGAGTAAGTTGTTTCTTGGAAACCTAAGTGCGTCGAGGGATTGGGGATTTGCCGGTGATTATGTTGAAGCTATGTGGTTGATGCTACAACAGGAAAAGGCTGATGATTATGTTGTGGCGACGGAGGATTCACATACGGTGGAAGAGTTTTTGGAAGTTGCTTTTGGTTATGTTGGATTGAATTGGAAGGATCATGTTGTGATTGATAAGAGATACTTTCGTCCTACTGAAGTTGATAATCTTAAAGGTGATGCTAGTAAAGCTAAGAAAGTTCTTGGTTGGAAACCTAAGGTTAGTTTTGAAGAGCTTGTTAGAATGATGGTTGATAATGATGTTGAGATGGCTAAGAAGGAGAAAGTGCTTGTTGATGCTGGGTACATTGATGCTCAACAACAACCTTGA 1110 0.4541 MADSSPKTPTPSTTNGDTTPPPRKVALITGITGQDGSYLTEFLLNKGYSVHGLIRRSSNFNTQRIDHIYVDPHDAHKAHMKLHYADLSDASALRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHIDATGRSHIRYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKVAAHWYTVNYREAYGIFACNGILFNHESPRRGENFVTRKITRVVGRIKIGLQSKLFLGNLSASRDWGFAGDYVEAMWLMLQQEKADDYVVATEDSHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPTEVDNLKGDASKAKKVLGWKPKVSFEELVRMMVDNDVEMAKKEKVLVDAGYIDAQQQP* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0863 369 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 24 349 IPR036291 -
Mtr5g0863 369 MobiDBLite consensus disorder prediction 1 20 - -
Mtr5g0863 369 PANTHER GDP-MANNOSE 4,6-DEHYDRATASE 17 364 IPR006368 GO:0008446|GO:0019673
Mtr5g0863 369 TIGRFAM gmd: GDP-mannose 4,6-dehydratase 24 350 IPR006368 GO:0008446|GO:0019673
Mtr5g0863 369 Gene3D - 217 343 - -
Mtr5g0863 369 Hamap GDP-mannose 4,6-dehydratase [gmd]. 24 353 IPR006368 GO:0008446|GO:0019673
Mtr5g0863 369 CDD GDP_MD_SDR_e 25 349 - -
Mtr5g0863 369 MobiDBLite consensus disorder prediction 1 23 - -
Mtr5g0863 369 Pfam GDP-mannose 4,6 dehydratase 27 343 IPR016040 -
Mtr5g0863 369 Gene3D - 27 333 - -
Mtr5g0863 369 PANTHER GDP-MANNOSE 4,6 DEHYDRATASE 1-LIKE 17 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0863 Mtr-Chr5 8505514 8507158 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0863 27 209 Miscellaneous Gene Families AT4G12250 27.895 4.32e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0863 K01711 - gmx:100777692 676.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0863 5 8505514 8507158 Mtr5g0863 5 8505514 8507158 ECH