Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0848 ATGATGTCGCCGTGTTTGTTGGTGTTTCTGTTCTTCATCTCTACAGTGTCGGCAACACCTCATTTGCTTCGACGTCGTTTGTCTGAATCTGCAAGATATCTGACTAAGGAAGAATTGTGGTTCCCCCAAACCCTCGATCACTACTCTCCCTATGATCACCGCAAATTCCAACAGCGTTACTATGAGTTCCTTGACCATTTTCGGATTCCAGATGGACCGGTGTTTTTGGTGATCTGTGGTGAATATTCATGCGATGGGATAAGAAATGACTATATTGGTGTTCTGGCAAAGAAGTTTGGAGCAGCTGTGGTTTCTCTTGAGCATCGCTATTATGGGAAGAGTTCGCCATTTAAATCTCTGGCGACAAAAAATTTGAGATATCTTTCATCTAAGCAGGCGCTCTTTGATTTGGCTGTTTTTCGCCAGAATTACCAGGACTCTTTAAATGCAAAGCTTAATAGAACAAATGCCGACAATCCCTGGTTCGTATTTGGTGTTTCATATCCTGGAGCTCTCAGTGCATGGTTCCGTCTTAAGTTTCCGCATTTAACATGTGGAAGTCTTGCAAGTTCTGCAGTTGTTCTTGCTGTTTACAACTTCACAGAATTTGATCAGCAGATTGGTGAGTCAGCAGGTGTTGAATGTAAGGCAGCATTACAAGAAACCACTCGACTTATCGAACGAAAACTTGTAACTAATGGAAAGGCATTGAAGGCTTCTTTTAATGCAGCTGATCTTGAAATTGATGGTGACTTCTTGTATTTCTTGGCTGATGCTGCTGTTACAGCGTTTCAATACGGGAATCCTGATATATTATGCAAGCCTCTTGTTAAAGCGAAGAAGGACGGCGAGGATTTGGTGGATGCTTATGCCAAATTTATCAAAGAGTTTTACCTTGGAACTGAAGGTGAAAGTACACAAGATTATAACCAAAACAACTTGAAGAACGCCGCTATCACTGAAAACAGTTCTGGTAGACTGTGGTGGTTTCAAGTTTGTACTGAGGTTGCATACTTTCAGGTGGCTCCCTCAAATGACAGTATACGCTCCTCAAAAGTCGACACAAGATACCATTTGGACCTTTGCAAAAATGTCTTTGGAGAGGGCATATTTCCTGATGTTGATGCAACTAATATATATTATGGAGGCACAAAAATTGCTGGTTCCAAAATAGTATTCACAAATGGCTCACAGGATCCTTGGCGTCGTGCATCAAAACAAATTTCATCACCTAATATGCCTTCCTACACTATCACTTGTCATAATTGTGGCCATGGAACTGACATGCGAGGATGCCCTCAAAGTCCCTTTAACATTGAAGGCAATGAGAAGAACTGCACATCCCCTGATGCTGTTCACAAAGTTAGACAAAAGATCATAGAGCATATGGATTTATGGTTGTCTCAGTGTCAGGACACGGGCAGGACTTGTATATAA 1437 0.4168 MMSPCLLVFLFFISTVSATPHLLRRRLSESARYLTKEELWFPQTLDHYSPYDHRKFQQRYYEFLDHFRIPDGPVFLVICGEYSCDGIRNDYIGVLAKKFGAAVVSLEHRYYGKSSPFKSLATKNLRYLSSKQALFDLAVFRQNYQDSLNAKLNRTNADNPWFVFGVSYPGALSAWFRLKFPHLTCGSLASSAVVLAVYNFTEFDQQIGESAGVECKAALQETTRLIERKLVTNGKALKASFNAADLEIDGDFLYFLADAAVTAFQYGNPDILCKPLVKAKKDGEDLVDAYAKFIKEFYLGTEGESTQDYNQNNLKNAAITENSSGRLWWFQVCTEVAYFQVAPSNDSIRSSKVDTRYHLDLCKNVFGEGIFPDVDATNIYYGGTKIAGSKIVFTNGSQDPWRRASKQISSPNMPSYTITCHNCGHGTDMRGCPQSPFNIEGNEKNCTSPDAVHKVRQKIIEHMDLWLSQCQDTGRTCI* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0848 478 PANTHER PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED 7 473 - -
Mtr5g0848 478 SUPERFAMILY alpha/beta-Hydrolases 42 202 IPR029058 -
Mtr5g0848 478 Pfam Serine carboxypeptidase S28 43 432 IPR008758 GO:0006508|GO:0008236
Mtr5g0848 478 Gene3D alpha/beta hydrolase 34 243 IPR029058 -
Mtr5g0848 478 Gene3D alpha/beta hydrolase 301 471 IPR029058 -
Mtr5g0848 478 PANTHER OS10G0511600 PROTEIN 7 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0848 Mtr-Chr5 8350570 8355093 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0848 - - mesc:110601726 781.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0848 5 8350570 8355093 Mtr5g0848 5 8350570 8355093 ECH