Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0844 ATGTCATCAACTCCGTCGCCATCGCCATCGCCATCGCCGTCGTATCTGACGCCGACGCAAAGATACGCCGCCGGAGCCTTATTCGGCCTTGCTCTACACCAAGCACAACTTCATCAAACCCACCCACTCGGCCTTTCAACCGACGATTTTCCTTCTCCGAGCAGTTCCACCTCCACCGGCGCGGTTTTCGAAGATCCTGACCTTTGGGTTCACCACACCTCCGGTTTGCTTCGCCCCGTTTTTATATTTCTTGATATTGATTCTGCAGCATGGTCTGGACTTGAGGAAACTTCTGGCTCTTCTGTGGCTACGCGTCATGTGGGACCGTTCTTGAGACTATTGTCAGAAGAATATGATGATGATAATGCTAAAAGGTTAGATCAAGAGCTTGCTTTGTCGGAAGCAGTTGATGCTTTGGTTCTCAGCTTAGAAAAAAATTCAGAGTCTTCGAGGTCAAAACGAAAGAAGTTGCGTGAATATGAGCATGAATGTCGTGAGAAGTTTTCAACTGCCGATGTTCAACCAAATTCTGAGAAGGTAGACATGCATTTGGAAACTCAGCAAGAGGAAGATACTCTTTTCTTTGAATGTGAAGAAGACCCACATGAGGGATCTTCTAACAGTAAGACTGATGAAGGTCCAGTTGAAGAGTTAATGATGCTCAGCTATCAGAGGAAAGTGACAGTTCTCTACCAACTTCTCGCTGCTTGTTTGTCGGATATTGGTGAAAAAAACACAAAATATACTCGGAGAAGAAAGGGATATGATGCTCGACATCGCGTGGCACTACGGCTGCTTGCAACTTGGCTCGATATCAAGTGGACAAAAATGGAGGCTGTTGAGATGATAGTTTCTAGTTCTGCAATGGCGATCGTTAAAGAGCAAGAATCAAATAAAGAAGCTCAATCAAATGAAAGCGGCTGGGCTAAATGGAAGCGGGGTGGTATTATTGGTGCTGCAGCGTTAACTGGGGGAGCTTTGATGGCTATTACTGGTGGATTAGCTGCCCCAGCAATTGCTGCAGGACTTGGTGCTTTGGCTCCAACTTTAGGTACTTTGATCCCTGTTATCGGAGCAGGTGGATTTGCAGCAGCTGCTAGTGCAGCAGGAACTGTTGCTGGTTCTGTTGCTGTTGCTGCCTCATTTGGAGCTGCTGGAGCAGGGCTTACTGGAACCAAAATGGCTAGAAGAGTTGGGAGTGTTGACGAATTTGAATTCAGAGCTATAGGTGACAACCATAACCAAGGCAGATTGGCGGTTGAGATATTGGTTTCCGGATTTGTCTTTGAGGAAGATGATTTTGTAAGGCCATGGGAAGGACAGAATGACAATTTGGAGAGGTATGCACTGCAGTGGGAGTCCAAGAATCTAATTGCCGTTAGCACTGCAATTCAGGACTGGCTTACTTCAAGAATTGCGATGGAGCTGATGAAGCAAGGGGCAATGATGACTGTCTTGAGTGCACTTTTAACTGCATTGGCTTGGCCAGCTGCATTGCTTGCCGCTACTGATTTCATAGACAGCACGTGGTCAATTGCTATTGACAGATCAGACAAGGCAGGGAAGCTGCTTGCTGAAGTGTTATTGGGAGGATTGCAGGGAAATAGGCCTGTGACACTTATAGGTTACTCACTTGGAGCAAGAGTTATTTTCAAGTGTCTAGAGTGTTTGGCTGAAACGGAAAACCATGCTGAACTTGTAGAAAGAGTTGTCCTTCTTGGAGCACCCATTGCAATCAAGGATGTGAATTGGGAAGCTGCTAGAAAGATGGTAGCTGGAAGATTTATAAATGCTTATTCAAGGACCGACTGGATGCTTGGAGTTGCTTTCCGTGCCAGCTTACTTTCTCAAGGTTTAGCTGGAATCCAGCCAATCGATATTCCTGGAATCCAAAATGTTGACGTGACAGATCGCATTGAGGGGCACTCTTCATATTTGTGGGCTACACAACAGATCTTGGATGAACTTGAACTGGAAACGTATTATCCCGTTTATAACAGCATTCTTCCTAAAGAGTAA 2019 0.4577 MSSTPSPSPSPSPSYLTPTQRYAAGALFGLALHQAQLHQTHPLGLSTDDFPSPSSSTSTGAVFEDPDLWVHHTSGLLRPVFIFLDIDSAAWSGLEETSGSSVATRHVGPFLRLLSEEYDDDNAKRLDQELALSEAVDALVLSLEKNSESSRSKRKKLREYEHECREKFSTADVQPNSEKVDMHLETQQEEDTLFFECEEDPHEGSSNSKTDEGPVEELMMLSYQRKVTVLYQLLAACLSDIGEKNTKYTRRRKGYDARHRVALRLLATWLDIKWTKMEAVEMIVSSSAMAIVKEQESNKEAQSNESGWAKWKRGGIIGAAALTGGALMAITGGLAAPAIAAGLGALAPTLGTLIPVIGAGGFAAAASAAGTVAGSVAVAASFGAAGAGLTGTKMARRVGSVDEFEFRAIGDNHNQGRLAVEILVSGFVFEEDDFVRPWEGQNDNLERYALQWESKNLIAVSTAIQDWLTSRIAMELMKQGAMMTVLSALLTALAWPAALLAATDFIDSTWSIAIDRSDKAGKLLAEVLLGGLQGNRPVTLIGYSLGARVIFKCLECLAETENHAELVERVVLLGAPIAIKDVNWEAARKMVAGRFINAYSRTDWMLGVAFRASLLSQGLAGIQPIDIPGIQNVDVTDRIEGHSSYLWATQQILDELELETYYPVYNSILPKE* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0844 672 Pfam Protein of unknown function (DUF726) 310 658 IPR007941 -
Mtr5g0844 672 Gene3D alpha/beta hydrolase 466 658 IPR029058 -
Mtr5g0844 672 PANTHER TRANSMEMBRANE/COILED-COIL PROTEIN (DUF726) 13 667 - -
Mtr5g0844 672 SUPERFAMILY alpha/beta-Hydrolases 528 586 IPR029058 -
Mtr5g0844 672 PANTHER TRANSMEMBRANE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 4 TMCO4 13 667 IPR007941 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0844 Mtr-Chr5 8294944 8302780 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0844 - - gmx:100782894 954.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0844 5 8294944 8302780 Mtr5g0844 5 8294944 8302780 ECH
Mtr5g0844 5 8294944 8302780 Mtr8g2433 8 34756384 34763965 PCT