Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0831 ATGGCAGGTTCATCAGAAGAGGGACAAGTAATTGGCGTTCACAACGTTGATGCATGGAACGATATCCTCCATAGGGGCAATGAATCCAAGAAACTGATTGTTGTGGATTTTACTGCTTCTTGGTGTGGACCATGCCGTTTCATTGCACCATTCCTTGCTGAGTTGGCCAAGAAGTATACAAATGCCATATTCCTTAAGGTGGATGTGGACGAATTGAAGTCTGTTGCTCAAGATTGGGCTATTGAAGCCATGCCAACGTTTGTTTTTGTGAAAGAAGGAACAATTTTGGGCAAAGTGGTAGGAGCAAAGAAAGATGAGCTGACACAGACAATAGAGAAACATGTGGCATCAGCCAATGTTTAA 363 0.4298 MAGSSEEGQVIGVHNVDAWNDILHRGNESKKLIVVDFTASWCGPCRFIAPFLAELAKKYTNAIFLKVDVDELKSVAQDWAIEAMPTFVFVKEGTILGKVVGAKKDELTQTIEKHVASANV* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0831 120 Pfam Thioredoxin 14 113 IPR013766 -
Mtr5g0831 120 ProSitePatterns Thioredoxin family active site. 34 52 IPR017937 -
Mtr5g0831 120 PANTHER THIOREDOXIN 5 117 - -
Mtr5g0831 120 PANTHER THIOREDOXIN H-TYPE 2 5 117 - -
Mtr5g0831 120 SUPERFAMILY Thioredoxin-like 7 117 IPR036249 -
Mtr5g0831 120 CDD TRX_family 28 112 - -
Mtr5g0831 120 ProSiteProfiles Thioredoxin domain profile. 1 116 IPR013766 -
Mtr5g0831 120 Gene3D Glutaredoxin 2 119 - -
Mtr5g0831 120 PRINTS Thioredoxin family signature 33 41 - -
Mtr5g0831 120 PRINTS Thioredoxin family signature 41 50 - -
Mtr5g0831 120 PRINTS Thioredoxin family signature 80 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0831 Mtr-Chr5 8153883 8156495 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0831 K03671 - gmx:100499701 211.075
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0831 5 8153883 8156495 Mtr5g0831 5 8153883 8156495 ECH