Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0818 ATGGTTAAGAAAACTGTATTGAAGGTTAATATCGATTGTCCAAAATGCAAAAAGAAACTCATCAAAACTGTCTCTTCTCTTGAAGGGATAGATAAAATTGAAGCTGATGAAGTGAAGGGAACATTGACAATATTAGGGGATGCAGACCCATATGACATAATAGTGCGAATAAGGAAAGCAGGAAAACATGCTGAAATTGTGAGTATTGGGCCTCCCCCAGGCCCTGCCCCTCTACCACCTGGGCCGGCGCCTCCGAAAACGGATGCTGCAAAAAAGCCCGCGGAAAATAAAAAGCCCGAAGAAAAGAGTAAGCCTGGAGATAAGGATAAGCCCAGCCCAGTGAGTTTGGACCAAATATCTTATGTGCTCTATACGCAGATGCCTTATTGCTACCCACAGTACCAGGGCCAGCCAGTTGCTGTGGTGTACATGAATAGGTGGGATGAACCCAATACATCTTGCACTATAATGTGA 474 0.4451 MVKKTVLKVNIDCPKCKKKLIKTVSSLEGIDKIEADEVKGTLTILGDADPYDIIVRIRKAGKHAEIVSIGPPPGPAPLPPGPAPPKTDAAKKPAENKKPEEKSKPGDKDKPSPVSLDQISYVLYTQMPYCYPQYQGQPVAVVYMNRWDEPNTSCTIM* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0818 157 MobiDBLite consensus disorder prediction 66 114 - -
Mtr5g0818 157 PANTHER OS04G0661100 PROTEIN 2 157 - -
Mtr5g0818 157 SUPERFAMILY HMA, heavy metal-associated domain 1 67 IPR036163 GO:0046872
Mtr5g0818 157 MobiDBLite consensus disorder prediction 70 87 - -
Mtr5g0818 157 ProSiteProfiles Heavy-metal-associated domain profile. 3 66 IPR006121 GO:0046872
Mtr5g0818 157 MobiDBLite consensus disorder prediction 90 111 - -
Mtr5g0818 157 CDD HMA 6 65 IPR006121 GO:0046872
Mtr5g0818 157 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 2 157 - -
Mtr5g0818 157 Gene3D - 1 72 - -
Mtr5g0818 157 Pfam Heavy-metal-associated domain 7 63 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0818 Mtr-Chr5 8056459 8057262 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0818 - - mtr:MTR_5g020960 252.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0818 5 8056459 8057262 Mtr5g0818 5 8056459 8057262 ECH