Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0816 ATGATGAAGCATTTTGCTTGGTTATTTCTTTTGGCCATTTTGGTCCATCAAGAGTGTTTCAATATCAATGTAGAAGCTGCTGGTGATGGTTTTGTCAGAACAAGAGGCATTCACTTTATGTTAAATGGAAATCCTTACTATGCAAATGGCTTTAATGCTTACTGGTTAATGTATACAGCTTCTGATCCATCTCAGAGATTCAAGGTTTCTAATGCTTTCCGTGAAGCAACTAGTCATGGACTTACTGTTGCTAGAACTTGGGCTTTCAGTGATGGTGGTTATAGTCCTTTGCAATATTCTCCTGGCTTCTACAATGAACAAATGTTTAAGGGATTGGATTTTGTTATATCTGAGGCTAGAAAGCATGGGATTAAGCTGATACTGAGCTTGGTGAACAATTATGAGAGTTTTGGAGGGAAGAAGCAGTATGTGAACTGGGCTAGAAGTAATAATGGACAGTATTTGACATCAGATGATGATTTCTTTAGGAACCCTGTTGTTAAAGGTTTCTACATCAATCATGTTAAGACTGTTCTTAACAGGTACAACAGTTTTACTGGAATTCATTATAAAGATGATCCAACAATCATGGCATGGGAGCTTATGAATGAACCTAGGTGTACATCAGATCCTTCAGGAAGGACTATTCAGGGTTGGATCACGGAAATGGCTTCTTTAGTGAAGTCCATTGACAGGAATCACTTATTGGAAGCTGGACTTGAAGGGTTTTATGGCCAATCAACACCACAAAGGACCAAATTTAATCCTACTATTAACAACATTGGGACAGACTTCATTGCCAACAATCGCATCCCAGGCATCGATTTTGCAACCGTTCATTGTTATCCCGACCAATGGGTACAAAGTTCAAATGAACAAGATCAGCTATCATTTTTGAACAACTGGCTTAGTGCTCATTTCCTAGACGCACAATATGCACTAAAAAAACCAATTCTAGTTGCAGAATTTGGAAAATCATTTAAAGATTCAGGTTTCAGTAGTAACCAGAGAGATCAACTTTTCAATACCGTGTACTACAAGATATATGCGTCTGCGAAAAGAGGCGGTCCTGCGAGTGGAGCATTGTTCTGGCAACTTCTTACAGAAGGAATGGAATCTTTCGACGATGGCTATGGAATATTGCTTGGTCAGAGTACTTCTACCGCTAATGTCATTGCTCAGCAATCTCATAAACTATACCTTATTCGGAAGATTTATGCAAAGATCGCTAATGAACGACGATGGAAAAGAGCTAGATTTAACGGAAGAAGGTCTTCACGCGATGGTGGAAATAGAGGAGGACAAATTGGGTTTTGA 1317 0.391 MMKHFAWLFLLAILVHQECFNINVEAAGDGFVRTRGIHFMLNGNPYYANGFNAYWLMYTASDPSQRFKVSNAFREATSHGLTVARTWAFSDGGYSPLQYSPGFYNEQMFKGLDFVISEARKHGIKLILSLVNNYESFGGKKQYVNWARSNNGQYLTSDDDFFRNPVVKGFYINHVKTVLNRYNSFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQGWITEMASLVKSIDRNHLLEAGLEGFYGQSTPQRTKFNPTINNIGTDFIANNRIPGIDFATVHCYPDQWVQSSNEQDQLSFLNNWLSAHFLDAQYALKKPILVAEFGKSFKDSGFSSNQRDQLFNTVYYKIYASAKRGGPASGALFWQLLTEGMESFDDGYGILLGQSTSTANVIAQQSHKLYLIRKIYAKIANERRWKRARFNGRRSSRDGGNRGGQIGF* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0816 438 SUPERFAMILY (Trans)glycosidases 31 392 IPR017853 -
Mtr5g0816 438 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE-LIKE PROTEIN 2 419 - -
Mtr5g0816 438 Pfam Cellulase (glycosyl hydrolase family 5) 68 343 IPR001547 GO:0004553|GO:0071704
Mtr5g0816 438 Gene3D Glycosidases 27 403 - -
Mtr5g0816 438 PANTHER - 2 419 IPR045053 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0816 Mtr-Chr5 8030383 8033828 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0816 2 436 Glycoside Hydrolase AT5G66460 66.055 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0816 K19355 - gmx:100792073 728.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0816 5 8030383 8033828 Mtr5g0816 5 8030383 8033828 ECH