Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0813 ATGGGAACGTTGGGAAGAGCTTTCTACACCGTCGGATTCTGGATCCGCGAAACTGGTCAAGCCATTGATCGTCTCGGTTCTCGTCTCCAAGGCAATTACTTCTTCCAAGAACAACTGTCAAGACATCGACCTTTGATGAATGTATATGATAAAGTTCCTTATGTTCATAAGGATGCATTTATTGCTCCTAGTGCTTCCATTACCGGCGATGTTCAGATTGGTCATGCTTCTTCCATTTGGTATGGTTGTGTTCTCAGAGGTGATGTTAACAACATTACTATTGGATCTTCAACTAATATACAAGACAATTCTCTTGTTCATGTTGCTAAGTCTAATTTGAGTGGAAGGGTATTACCTACTATCATTGGAGATAACGTCACTGTAGGTCACAGTGCTGTGTTACAAGGATGCACTGTTGAGGATGAGGCATTCATTGGCATGGGTGCAACCTTACTTGATGGTGTGCATGTTGAGAAACATGCCATGGTTGCTGCCGGAGCTCTTGTCAGGCAGAATACAAGAATCCCCTGTGGAGAGGTCTGGGGAGGTAATCCGGCAAGGTTCTTGAGGAAGCTCACAGAAGATGAAATGACCTTCTTCTCACAATCTGCTTTAAATTATTCCAATTTGGCTCAGGCTCATGCTGCTGAAAATGCAAAAAAGCTGGATGAGACTGAATTTGTGAAAGTTCTTGGCAAGAAATTTGTTCGTCCTGACGAAGTTGATTCCGTACTCAATGCTGTTGGCGACACACCTCCAGAGATTACCCCCCCTGATAATGCTGCGCTAGATAAAGCTCCAAAGGCTTCTTAA 813 0.4367 MGTLGRAFYTVGFWIRETGQAIDRLGSRLQGNYFFQEQLSRHRPLMNVYDKVPYVHKDAFIAPSASITGDVQIGHASSIWYGCVLRGDVNNITIGSSTNIQDNSLVHVAKSNLSGRVLPTIIGDNVTVGHSAVLQGCTVEDEAFIGMGATLLDGVHVEKHAMVAAGALVRQNTRIPCGEVWGGNPARFLRKLTEDEMTFFSQSALNYSNLAQAHAAENAKKLDETEFVKVLGKKFVRPDEVDSVLNAVGDTPPEITPPDNAALDKAPKAS* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0813 270 MobiDBLite consensus disorder prediction 246 270 - -
Mtr5g0813 270 Pfam Hexapeptide repeat of succinyl-transferase 119 151 IPR001451 -
Mtr5g0813 270 PANTHER DYNACTIN SUBUNIT P25 1 269 - -
Mtr5g0813 270 CDD LbH_gamma_CA_like 55 212 - -
Mtr5g0813 270 Gene3D Hexapeptide repeat proteins 44 223 - -
Mtr5g0813 270 PANTHER GAMMA CARBONIC ANHYDRASE 1, MITOCHONDRIAL-LIKE 1 269 - -
Mtr5g0813 270 SUPERFAMILY Trimeric LpxA-like enzymes 45 212 IPR011004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0813 Mtr-Chr5 8010232 8014282 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0813 K01726 - gmx:100794184 463.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0813 5 8010232 8014282 Mtr5g0813 5 8010232 8014282 ECH