Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0800 ATGCAACAAACTGATAGATCATTTCACCTTCTCAATACAAGTATTCAAACACACACACACACACACACGTATATATATGTGCACCACAATGTATCTGTACTCACAAGATTCAAAATAAGTAAAAAGAAGTTAAACATCAAGCAGAACATAATGGCAAGCTTGGGAAGTTTCATGTCTGTATTAAACTTTCTCTTATTTCTCTTTGTTGGTTTAATCTCTTCATCTGAAGCTGCCATAAAGAAATACCAGTTTGATATTCAAGTGAAGAATGTGAGTAGACTGTGCCATGCAAAACCCATTGTAACTGTAAATGGGAGGTTTCCAGGGCCAACTATCTATGCTAGGGAAGGAGATCAAGTGTTTGTCAACGTTACCAACCATGCACAATACAACATGTCGATTCATTGGCATGGACTTAAACAATATCGTAATGGTTGGGCGGATGGACCGGCTTACATCACACAGTGTCCGATACAGACCGGAAACAGCTATACTTACGAATTCAACGTTACTGGGCAAAGAGGAACACTATGGTGGCATGCACACATTTTCTGGCTTAGGGCCACTGTCTACGGGGCAATAGTAATTATGCCTAAACTTGGAACACCATTTCCTTTCCCACAGCCAGCTAGAGAATTCGAAATTGTCTTAGGTGAATGGTGGAACAATGATGTGGAAGAGATTGAAAAGCAAGGGAACAAATTGGGGTTGCCACCAAATATGTCAGATGCACATACGATCAATGGAAAACCAGGACCACTATTTCCTTGTTCTGAGAAGCACACATTTGCAATGGAGGTAGAACAAGGGAAGACATACCTCATGAGAATCGTCAACGCTGCCCTCAACGATGAGCTTTTCTTTGCCATTGCGGGTCACAACATGACAGTAGTGGAGGTTGATGCTGTTTATACAAAACCATTCACCACTCAGGCTATACTAATTGCTCCTGGTCAAACCACAAACGTTCTGGTTCATGCCAATCAAGTTGCTGGTAGGTACTTTGTGGCCACCAAGGCTTTTATGGATGCCCCAATTCAAGTTGACAACAAAACTGCTACAGCTATACTTCAATACAAAGACATCCCAAACACTGTCCAACCCATCCTTCCACAGTTGCCAGCTAGCAATGACACAGGTTTTGCTTTGAGTTACAACAAAAAGCTCAGAAGCTTGAACTCTGCTAAGTACCCTGCTAATGTTCCTCTCAAAGTTGATAGAAACCTCTTTTACACTATTGGTTTAGGCAAGAATTCTTGCCCCACATGCCTCAATGGAACCAGGTTTCTTGCTTCCATAAACAATGTATCTTTTGTGATGCCTCAAATTGCGCTTCTCCAAGCTCACTACTTCAACATCAAGGGTGTTTTCAGAGCTGATTTTCCTGACCGCCCACCAACTCCTTTCAACTATACCGGTGCGCCATTAACCGCCAACCTTGCCTCTTTGACAGACACAAGAGTAAACAAGATTGCCTTCAATTCTACTGTTGAGCTAGTTTTGCAGGATACTAATCTCCTCACAGTTGAATCACATCCATTTCATCTTCATGGATATAACTTTTTCGTTGTCGGAACTGGTATCGGTAATTTTGATCCTGCTAAAGACCCTGCCAAATACAACTTGGTAGATCCTATTGAAAGGAACACAATTGGGGTTCCTACAGGTGGTTGGACCGCAATTCGCTTCCAAGCAGATAATCCAGGTGTTTGGTTCATGCATTGTCATTTGGAGTTGCACACTGGTTGGGGGTTGAAAACAGCTTTCCTTGTTGAAAATGGACCAAACCAAGGTCAATCGGTTCTGCCACCACCAAAGGACCTTCCTTCATGCTAG 1836 0.4237 MQQTDRSFHLLNTSIQTHTHTHTYIYVHHNVSVLTRFKISKKKLNIKQNIMASLGSFMSVLNFLLFLFVGLISSSEAAIKKYQFDIQVKNVSRLCHAKPIVTVNGRFPGPTIYAREGDQVFVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIQTGNSYTYEFNVTGQRGTLWWHAHIFWLRATVYGAIVIMPKLGTPFPFPQPAREFEIVLGEWWNNDVEEIEKQGNKLGLPPNMSDAHTINGKPGPLFPCSEKHTFAMEVEQGKTYLMRIVNAALNDELFFAIAGHNMTVVEVDAVYTKPFTTQAILIAPGQTTNVLVHANQVAGRYFVATKAFMDAPIQVDNKTATAILQYKDIPNTVQPILPQLPASNDTGFALSYNKKLRSLNSAKYPANVPLKVDRNLFYTIGLGKNSCPTCLNGTRFLASINNVSFVMPQIALLQAHYFNIKGVFRADFPDRPPTPFNYTGAPLTANLASLTDTRVNKIAFNSTVELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPAKDPAKYNLVDPIERNTIGVPTGGWTAIRFQADNPGVWFMHCHLELHTGWGLKTAFLVENGPNQGQSVLPPPKDLPSC* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0800 611 ProSitePatterns Multicopper oxidases signature 1. 569 589 IPR033138 -
Mtr5g0800 611 Gene3D - 210 395 IPR008972 -
Mtr5g0800 611 SUPERFAMILY Cupredoxins 206 392 IPR008972 -
Mtr5g0800 611 Gene3D - 421 611 IPR008972 -
Mtr5g0800 611 Pfam Multicopper oxidase 215 360 IPR001117 -
Mtr5g0800 611 TIGRFAM laccase: laccase 77 611 IPR017761 GO:0046274|GO:0048046|GO:0052716
Mtr5g0800 611 CDD CuRO_3_LCC_plant 456 594 IPR034289 GO:0005507
Mtr5g0800 611 Gene3D - 71 198 IPR008972 -
Mtr5g0800 611 Pfam Multicopper oxidase 461 593 IPR011706 GO:0005507|GO:0016491
Mtr5g0800 611 CDD CuRO_1_LCC_plant 82 198 IPR034288 GO:0005507
Mtr5g0800 611 ProSitePatterns Multicopper oxidases signature 2. 574 585 IPR002355 GO:0005507
Mtr5g0800 611 PANTHER LACCASE 59 611 - -
Mtr5g0800 611 PANTHER MULTI-COPPER OXIDASE 59 611 IPR045087 -
Mtr5g0800 611 CDD CuRO_2_LCC_plant 215 359 IPR034285 -
Mtr5g0800 611 SUPERFAMILY Cupredoxins 402 611 IPR008972 -
Mtr5g0800 611 SUPERFAMILY Cupredoxins 80 223 IPR008972 -
Mtr5g0800 611 Pfam Multicopper oxidase 86 199 IPR011707 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0800 Mtr-Chr5 7921245 7923862 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0800 K05909 - gmx:100798427 1053.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0800 5 7921245 7923862 Mtr5g0800 5 7921245 7923862 ECH