Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0796 ATGTCCGCCGCTAAATTAACCTCATGCCTCGCCGCAGCCACCGCCGCCGCAGCGGCTTCAATCTCCTCGCAATCCAATCCTGCTTACTCCGAATCTTTCTTCCGTTTCCCCTTTTTCTCTTCTTCACCTTCCAATTCACCTCCGCCAACGGACCAATCATCTGATAAAAAATCGGATTCACCGCCGCCGGCGGAAGAACCTAATAAGTCCGGTTTTGATCCTGAATCGTTAGAAAGAGCTGCTAAAGCTCTCCGTGAAATCAACAGTTCTCCTCACGCTAAAAAGGTGTTTGATTTAATGCGTAAACAAGAACAATCTCGTCTTGCTGAGTTAGATGCTGAAAAAGTTAATTATGAACTTATTCAGACTCAAGGAGATATTGATAGGTTGCGTAAAATGGCTGAAGAACAACGAAATCTAATACAAGAGCAGAACCAGAGGCAGGCTCAGGTGTTACGATTTGAAGATGAATTGGCAAGGAAAAGAATGCAGACAGATCATGAAGATCAAAGGCGACATAATGTTGAGTTGGTCCAGATGCAAGAGAAGTCTTTTGTACGAAAGGAGCAGGCAAGAAAGGATTCCGAAGAACAGATGCAAGCTCAGAAACTTCTGACTGAGCAAAAGAAAGCGGAAATAGACAAAGAAACCATTAGAGCTAAGGAAAAGGCAAATGCTGAAAAACGAATCCGTTTAAAGGTATTGACAGAGGAGCAAAACAGGAGAGAGCTTAAAGACAAACTGCAGGGGGAAACAGATAAATGGATTGCTGCAATTAATGCTACTTTTAGTCATATTGAAGGTGGTCTAAGGATATTATTGACCGATAGGGACAAATTGCTTATGACTGTTGGTGGAGCTACTGCATTAGCTGCAGGAGTATATACGACGAGAGAAGGCGCAAAAGTAACATGGGGATATATTAATCGGATTCTGGGGCAGCCATCATTGATCCGGGAATCATCAATGGCAAAGTTTCCGGGATCAAGGATGATGTCTCAAGCCAAAAATAAAGTTTTAAATTATAGTACCTTGGCCAGGGAAAAAAAGTCTGTTGGGATTCAAAATGGTCTTGGAAATGTAATCTTGCATCCCTCATTGCAGAGAAGAATAGTGCATTTAGCACGGGCAACATCAAACACGAAGGCCCATCAGGCACCGTTTCGTAACATGCTTTTTTATGGGCCTCCTGGGACTGGTAAAACCATGGTTGCAAGGGAAATAGCTAGAAAATCGGGTTTGGATTATGCAATGATGACCGGAGGAGATGTTGCACCTCTGGGCCCACAGGCTGTTACCAAAATTCACGAGATATTTGATTGGGCCAAGAAATCTAAAAGAGGCCTGTTGCTTTTTATTGACGAGGCAGATGCTTTCCTTTGCGAGCGTAATAGCTCACACATGAGTGAAGCTCAACGAAGTGCCCTAAATGCATTGCTTTTCAGAACTGGTGATCAGTCTAGAGACATAGTACTTGTGCTTGCGACAAACAGACCAGGAGATCTTGATAGTGCAATTACTGATCGTATTGATGAAGTGATTGAATTCCCACTTCCAGGAGAGGAGGAGCGTCTTAAGTTATTGAATCTCTATTTGAACAAGTATCTATGTGATGAAAGTAATGGCTCCAAGGGGGGATTATTTATGAAGAAGCAGCCCCAGCAAATTACCATAAAAGATTTATCAGAAGACGTGCTGAAAGAGGCTGCCAAGAAAACAGAGGGATTTTCTGGCCGTGAGATAGCCAAACTCATGGCCAGCGTCCAAGCTGCTGTCTATGGGCGTCCTGATTGCGCCTTGGATTCTAAGTTGTTTAGAGAAATTGTTGATTACAAGGTGGTGGAACATCATCAGCGGTTAAAACTAGCAGCTGAAGGCGGCCTCCCTGCCTGA 1893 0.4363 MSAAKLTSCLAAATAAAAASISSQSNPAYSESFFRFPFFSSSPSNSPPPTDQSSDKKSDSPPPAEEPNKSGFDPESLERAAKALREINSSPHAKKVFDLMRKQEQSRLAELDAEKVNYELIQTQGDIDRLRKMAEEQRNLIQEQNQRQAQVLRFEDELARKRMQTDHEDQRRHNVELVQMQEKSFVRKEQARKDSEEQMQAQKLLTEQKKAEIDKETIRAKEKANAEKRIRLKVLTEEQNRRELKDKLQGETDKWIAAINATFSHIEGGLRILLTDRDKLLMTVGGATALAAGVYTTREGAKVTWGYINRILGQPSLIRESSMAKFPGSRMMSQAKNKVLNYSTLAREKKSVGIQNGLGNVILHPSLQRRIVHLARATSNTKAHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLGPQAVTKIHEIFDWAKKSKRGLLLFIDEADAFLCERNSSHMSEAQRSALNALLFRTGDQSRDIVLVLATNRPGDLDSAITDRIDEVIEFPLPGEEERLKLLNLYLNKYLCDESNGSKGGLFMKKQPQQITIKDLSEDVLKEAAKKTEGFSGREIAKLMASVQAAVYGRPDCALDSKLFREIVDYKVVEHHQRLKLAAEGGLPA* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0796 630 SMART AAA_5 387 520 IPR003593 -
Mtr5g0796 630 PANTHER AAA-TYPE ATPASE FAMILY PROTEIN 1 627 - -
Mtr5g0796 630 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 376 613 IPR027417 -
Mtr5g0796 630 ProSitePatterns AAA-protein family signature. 490 509 IPR003960 GO:0005524|GO:0016887
Mtr5g0796 630 Coils Coil 127 147 - -
Mtr5g0796 630 PANTHER PUTATIVE ATP-ASE 1 627 IPR039188 GO:0005739|GO:0007005
Mtr5g0796 630 Coils Coil 218 254 - -
Mtr5g0796 630 MobiDBLite consensus disorder prediction 40 77 - -
Mtr5g0796 630 CDD AAA 383 518 - -
Mtr5g0796 630 Pfam ATPase family associated with various cellular activities (AAA) 391 518 IPR003959 GO:0005524|GO:0016887
Mtr5g0796 630 Gene3D - 331 537 IPR027417 -
Mtr5g0796 630 MobiDBLite consensus disorder prediction 40 57 - -
Mtr5g0796 630 Pfam ATPase family AAA domain-containing protein 3, N-terminal 52 319 IPR021911 -
Mtr5g0796 630 Coils Coil 101 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0796 Mtr-Chr5 7867425 7874524 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0796 389 594 Miscellaneous Gene Families AT5G53170 31.628 1.73e-14 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0796 K17681 - gmx:100777755 931.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0796 5 7867425 7874524 Mtr5g0796 5 7867425 7874524 ECH